Silene latifolia (white campion): 141646643
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Entry
141646643 CDS
T11116
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141646643
04121 Ubiquitin system [BR:
slaf04121
]
141646643
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141646643
Membrane trafficking [BR:
slaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141646643
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141646643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
zf-Nse
CxC4
EHMT1-2_CRR
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
141646643
NCBI-ProteinID:
XP_074310633
LinkDB
All DBs
Position
3:complement(1354505..1357171)
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AA seq
335 aa
AA seq
DB search
MMSSNGGNTHWCYQCRQPIRARSRGTVCPICDGGFIQELQELRGGGGGGGGGGGGGGGGG
GVSGGYGSYGHRDGPDQVFGIMEALDSLMLSSNPEHRVGLIEALDASMGQRRRYGMDDRS
PWLIFQGQVPGRMPRNAGFEMFFNGNHPGIRGNNGDFFVGPGLQELIEQLMVERQGPPPA
PRAAIDGMPTIKITRARLQTDSHCPVCQDRFELGSEARQMPCNHIYHHDCIVPWLTEHNS
CPVCRQEMGPVPSTRGSNPGTGIRSTSGGGNSRGRDSSDQNPGRRNPFSFLWPFRSSNTS
SNRGYVETNRSNPATSTTTPGENHERDYSGWPFDY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctaatggtgggaatacacattggtgttaccaatgtaggcaacccattcgt
gctcgaagtcgaggcactgtatgccctatttgcgacggagggtttattcaggagttacaa
gagttacgcggaggtggaggtggaggtggaggtggcggtggcggtggcggtggtggtggt
ggtgttagtggtgggtatggctcttatgggcatagagatggtcctgaccaagtgtttgga
ataatggaagctttagactcattgatgcttagtagcaacccggagcatagggttgggtta
atcgaagctttggatgcatctatgggacaaaggagaaggtatggtatggatgatcggagt
ccttggttgatttttcaagggcaagttccgggtaggatgcctagaaatgccgggtttgag
atgtttttcaatggaaaccatccaggaattcgggggaacaatggcgatttctttgttgga
cctggcctgcaagagttgatagagcagcttatggtggaaaggcagggtccaccaccggcc
cctcgcgctgcaattgacggaatgcccacgatcaagatcacgcgggctcgtcttcagaca
gattcacactgccccgtgtgtcaagatcggtttgagctcggctctgaagcaaggcagatg
ccttgcaaccatatttaccaccatgattgcattgtcccttggttgaccgaacacaactcg
tgccctgtttgtcgtcaagaaatgggccctgtcccatctacccgtggtagtaacccaggt
accggaattagaagcactagtggtggtggtaactcaagagggagggatagtagtgatcag
aacccgggaaggaggaacccattctcgttcttgtggccctttcgctcatcaaataccagt
agtaaccgaggttatgttgaaacaaaccggagcaacccagctacaagcacaactactcct
ggcgagaatcacgagagggactattctggttggcctttcgattactag
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