Silene latifolia (white campion): 141646713
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Entry
141646713 CDS
T11116
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141646713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141646713
04147 Exosome [BR:
slaf04147
]
141646713
04090 CD molecules [BR:
slaf04090
]
141646713
Enzymes [BR:
slaf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
141646713
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
141646713
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141646713
CD molecules [BR:
slaf04090
]
Proteins
141646713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
DUF87
AAA_30
AAA_15
DEAD
DUF815
Motif
Other DBs
NCBI-GeneID:
141646713
NCBI-ProteinID:
XP_074310722
LinkDB
All DBs
Position
3:2216003..2225230
Genome browser
AA seq
1259 aa
AA seq
DB search
MNGDEEATTSNVEAAGQTRQETEKKEKEVAKKVPFYKLFSFADSTDKALMSVGCIAAVGN
GVSMPLMAILLGDLIDAFGHNQNTRHVIHVVSQVALKFVYLAIGSGIAACLQVSCWMISS
ERQAARMRNLYLKTMLRQDISFFDKEVNTGEVVGRMSGDTVLIQNAIGEKVGQFIQSIST
FIGGFVIAFTKGWLLTLVMVSSIPLLVFAGSLTSIFLSRMATRGQTSYAKAAIIVEETIS
SIRTVASFTGEKKAIAEYNKSILDAYRAGVQEGLAAGSGLGVVMFIVFCSYALAIWFGSR
MILQGHYTGGVVINVIVAVLTGSMSLGHASPSMSAFASGQAAAYKMFETINRKPEIDPYD
PSGKILDDIHGDIELRDIYFSYPTRSAEQIFSGFSLSIQSGTTAALVGQSGSGKSTVISL
IERFYDPHAGEVLIDGINIKEFQLRWIRQKIGLVSQEPVLFASSIKDNIAYGKDGATDEE
IRTAIELANASRFIDKLPQGLDTSVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATS
ALDAESERIVQEALDRIMVNRTTIIVAHRLSTVRNADTIAVIHQGKVVEKGQHTELVRDP
EGAYSQLIRLQDMRKESRHSERGGDMLRQASQRGLSLRSSSHGSSVSSNDHTFSVAVVPS
DFPERAVEALSEKRPQVSIRRLASLNKPEIPTLILGSLSAIASGVIFPLFGVLFSGVIKM
FFKTPHELRTDSRFWALMFVVFGVASLLSYPARSYFFAVAGCKLIRRIRSMCFEKVVHME
VGWFDEPENSSGTIGARLSSDAASVRGLVGDALGLLVQNLASAISGLLIAFLANWILAFI
ILAMIPLLGLNGYFQLKFMKGFSEDAKKKYEEASHVANDAVGSIRTVASFCAEEKVMQLY
EKKCEAPVKAGIKRGLISGIGYGLSFALLFNVYALSFYAGALLVGHGETTFSDVFRVFFA
LAMAAVGVSQSSSLAPDTSKAKSAAASIFAILDRKSKIDPSDESGMTLEQVKGEIQFQHV
SFAYPTRPDVQIFRDLCLTIHCGKTLALVGESGSGKSTVVSLLQRFYDPDSGCITLDGFE
IQKLQLKWLRQQIGLVSQEPILFNDTIRANISYGKGGNATEAEIIVAAELANAHNFISSL
QQGYDTIVGERGVQLSGGQKQRVAIARAIVKNPRILILDEATSALDAESEKVVQDALDRV
MVNRTTLIVAHRLSTIKNADRIAVVKNGVIAEKGKHEKLIHIKDGLYASLVALHMSASS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggacgaggaagcgacaacttccaatgtcgaagctgcaggacaaacccgacag
gagactgaaaagaaagaaaaggaagttgctaagaaagtcccattttacaagctattctct
ttcgcggactctactgacaaggcgctaatgagcgttggctgtattgctgctgttggaaat
ggggtatctatgcctttgatggcaattcttttaggtgatcttattgacgcgtttggtcac
aaccaaaatactcggcatgttatccatgttgtctctcaggtggctctgaaattcgtctat
ttggccattggatcgggaatagctgcatgtctccaggtgtcttgctggatgatatcaagc
gaaaggcaggcagcaagaatgaggaacttgtatctgaaaaccatgctcaggcaagatatt
tcattctttgataaagaagttaacacgggagaggtcgttgggaggatgtcaggtgatacc
gttcttatacaaaacgctattggggagaaggtcggacaatttatacaatcaatatccaca
ttcattggaggatttgtcatcgcgttcaccaaaggatggcttcttactttagtcatggtg
tcctcaataccccttcttgtgtttgctggttcacttacgagcatctttttgtcacggatg
gcgaccagagggcaaacttcttacgcaaaggcagcaatcattgtggaggaaactataagt
tcaattagaacagtggcgtcttttacaggagaaaaaaaagctattgctgaatacaacaaa
tctattcttgacgcctacagagcaggtgttcaggaaggactggctgcaggatcagggttg
ggtgtggttatgtttattgttttttgcagctatgctttagccatatggttcggatcaagg
atgattcttcaaggacattacactggaggtgttgtcattaatgtcattgtagctgtcttg
actggttccatgtcactgggacatgcatcgcccagcatgagcgcatttgcttcaggccaa
gcagcggcatacaagatgtttgaaaccatcaatagaaaaccagagattgatccttatgat
ccaagcgggaaaatactggatgatattcatggtgacattgagttgagagacatttatttt
agttatccgaccagatctgctgagcaaatttttagcggattttccctttcaatccaaagt
ggaacaactgcagcattagttggacaaagtggtagtggcaaatcaacagtgatcagcctt
atagagagattctacgatccacatgccggagaggttctaatagatggaattaacataaaa
gaatttcagttaagatggattaggcagaaaattggcctagtaagtcaggagcctgtactg
tttgcttcttcaataaaagataacatcgcatatggaaaggatggagctacagatgaagag
ataaggacggctattgagctcgcaaatgcctccaggtttattgataaattaccacaggga
ctggatacatcagtcggggagcatggaactcaattgtctggaggacagaagcagagagtc
gctatagcacgagccattttgaaggatccacgtatcttacttttggacgaagctactagt
gcactcgatgctgaatctgagaggatcgtgcaggaagcattagacaggataatggtaaat
agaacaactattatagttgcacatcgcttgagtacagtgcgcaatgctgataccattgca
gttattcaccaggggaaggtggttgagaaaggtcagcacactgaactagtcagggatcca
gagggagcatactctcaacttatacgcttacaagacatgagaaaagagtctcgacattct
gagagaggtggggatatgttgcgacaggcaagtcaaaggggattatccttacgatcatca
agtcacgggtcctcagtgagcagcaatgatcacaccttttcagtagctgtagtaccatca
gactttccagaacgcgctgttgaggcactttctgaaaaacggccacaagtttcgataagg
cgtcttgcctctcttaacaagcctgaaataccaacgcttattcttggatctctatctgcc
attgctagtggtgttatattccccttgtttggtgtactcttttcgggtgtgatcaaaatg
tttttcaagacacctcatgagttgagaactgattcaagattttgggccctaatgtttgta
gtatttggagtggcgtcattactatcatacccagctcgatcctacttctttgcagtggct
ggttgtaagttaatacgaaggataagatcaatgtgctttgagaaagtagtccacatggag
gtcggttggtttgacgagcctgaaaattcaagtggtacaattggcgcaaggttgtcttct
gatgctgcaagtgtccgtggtttggtgggagatgcacttggtttgctcgttcaaaatctc
gcttcagcaatatctggcctgctgattgctttccttgcaaattggatcttagcttttatt
atccttgcaatgataccccttttaggtcttaatggctatttccagctgaagtttatgaaa
ggattcagcgaggatgccaagaaaaaatacgaggaggccagccatgttgctaatgatgcg
gtaggtagcataagaactgttgcatctttctgtgctgaggagaaggtaatgcaactttat
gaaaagaaatgtgaagctcctgtgaaagctggtatcaagcgaggactgataagtgggata
ggctatgggttgtcttttgctttacttttcaacgtctatgccctcagtttttatgcagga
gcactgcttgttggccatggggaaacaactttttctgatgtgttccgagttttctttgca
ctagccatggcagctgtaggagtatcacaatcgagctccttggctccggacactagcaaa
gccaagagtgctgcagcttctatatttgcaattctggatcgcaaatctaagattgaccca
agtgacgaatcaggcatgactttggaacaagtaaagggtgaaatacagtttcagcatgtg
agctttgcatatcccactagacctgatgttcagatattccgggacctttgtttgactatt
cattgtgggaagactttagctcttgttggagaaagtgggagtggtaaatcaacggtagta
tccttgttgcaaagattttatgatcccgattctggatgcatcactctagatggctttgaa
attcagaagttgcagttgaaatggttgaggcaacaaattgggcttgtaagtcaggaacct
attctattcaatgacacgattcgtgccaacatttcctacggaaagggagggaatgccaca
gaggctgagatcattgtcgctgctgagctggcaaatgctcacaatttcatctccagcttg
cagcagggttatgatacaattgttggggaacggggagtacaattgtcaggagggcaaaaa
caacgagttgcaatagctcgagccatagtaaagaatccacgaatactgatattggatgaa
gctacaagtgcacttgatgctgagtctgagaaagttgttcaggatgcattagatcgagtc
atggtgaaccgcactacactcattgttgctcataggttatccacaattaagaatgctgac
aggatcgcggtggtgaaaaatggtgtcatagccgagaaagggaagcatgaaaagcttatt
cacatcaaagatggactgtatgcttctttggttgcccttcacatgagtgcatcctcctag
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