Silene latifolia (white campion): 141646714
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Entry
141646714 CDS
T11116
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141646714
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141646714
04147 Exosome [BR:
slaf04147
]
141646714
04090 CD molecules [BR:
slaf04090
]
141646714
Enzymes [BR:
slaf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
141646714
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
141646714
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141646714
CD molecules [BR:
slaf04090
]
Proteins
141646714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
Zeta_toxin
AAA_21
DEAD
AAA_15
AAA_30
AAA_24
DUF815
AAA_25
AAA_7
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
141646714
NCBI-ProteinID:
XP_074310724
LinkDB
All DBs
Position
3:2225641..2234606
Genome browser
AA seq
1261 aa
AA seq
DB search
MSKMNTIEEEASSSSNTTDPNHKESPNKEEDVSGNKVPFYKLFSFADSTDITLMIIGSVG
AVGNGLAMPVMSVLLGQLVDAFGQNQDTHHIIHIISKVALRFVYLALSIAVAAFIQVSCW
MITGERQAARMRNLYLKSILRQDIAFFDKETNSGEVIGRVSGDTVLIQDALGEKVGKFIQ
LTSTFIGGFVIGLIKGWFLTLVMLSSMPVLAFAGALMSIILSRMAAKGQNAYERAASIVD
QTITSIRTVASFTGEEHAIAQYNEAIVMAYKSGVHQGLAAGSGLGAVLFVIFCSYPLAIW
FGARMIIQGHYTGGTVITVIVAVLTGSMSLGEASPSISAFAAGQAAAYKMFETIKRKPAI
NPCDPKGKVLDDIHGDIEVVDVYFSYPVRPNEHIFNGLSLSMARGTTTALVGQSGSGKST
VISLIERFYDPLSGEVRIDGINIKEFQLKWIRAKIGLVSQEPVLFGSSIRNNIAYGRDGA
TTEEIRLAAELANASKFIDKLPQGLDTLVGEHGTQLSGGQKQRVAIARAILKNPRILLLD
EATSALDAESEKIVQEALDRIMVDRTTVVVAHRLSTIRDADVIAVIHQGKLVEKGSHAEL
LNDPEGAYSQLINLQAKESRPVSRQLTPTRSFIRSFNNRTLLSSNSFSFSPLPVGFAVSP
LREREDDLFPPSKEHPKVSVKYLASLNKPEIPALILGSLSAIISGLVYPIFGVLFSGIIA
MFYKPPHELRNDARFWALMFLAFGLVSLLSNPARGYFFAVAGGRLIQRIRAMCFERVVRM
EVGWFDEVENSSGAIGARLSSDAASIRALVGDAFGLLVQNISTAIAGLLIAFLANWMLAF
IVLALIPLIGINGYLQLKFTQGFSADAKKMYEEASQVASEAVGSMRTVASFCAEEKVIQV
YEEKCKGPVKAGIKRGLISGVGFGMSFALLYSVYALSFYAGAQLVGHGKATFSDVFRVFF
ALTMTAVGMSQSSSLAPDTGKAKSAASSVFAILNRKSKIDSSDETGTTLDEVKGDIELQH
VSFAYPTRPDVQIFQGLCLSIRSGKKVALVGESGSGKSTVISLLQRFYDPDSGCITLDGI
EIQKYKLKWLREQMGLVSQEPSLFNDTIRANIAYGKGGNATEAEIIAASEKANAHKFICS
LEQGYDTLVGERGVQLSGGQKQRVAIARAIVKNPRILLLDEATSALDAESEKAVKNALEQ
VMINRTTVIVAHRLSTIKNADVIAVVKNGVIAERGNHEKLIRIKDGAYASLVAVHTNASS
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatgaatacaatagaagaagaagcaagttccagttcaaatacgactgatccg
aatcataaagagagtcccaacaaggaagaggatgtttctgggaacaaagttcccttctac
aagctcttctcttttgcagattctactgacattacattgatgattattggttccgttggt
gctgttggtaatggattggctatgcccgtgatgtccgttcttttgggtcaacttgttgat
gcttttgggcaaaatcaagatacccatcacataattcatatcatttccaaggtagctcta
agatttgtgtacctggccttgagcatagcagtcgctgcatttattcaggtgtcttgctgg
atgataaccggagaaaggcaggctgcaagaatgaggaatttgtatctgaaaagtatactt
aggcaggacattgcttttttcgacaaagaaacaaattcaggagaagtaattgggagggta
tcaggtgacactgtccttattcaagatgccctgggagaaaaggttgggaagttcatacag
ctaacatctacatttataggagggtttgtcattggattgatcaaaggatggtttcttact
cttgtcatgctatcctccatgcctgttttggcttttgccggtgcgcttatgagcataatt
ttgtcaaggatggcagcaaaaggccaaaatgcttatgaaagagcagcatccattgtagat
cagactataacttctattagaacagtagcatcctttaccggagaagaacatgcaattgct
cagtacaatgaagctattgtgatggcctataaatcaggggtccatcagggactggcggca
gggtcgggcctgggtgctgttctgtttgtcatattttgcagttatcctttagccatatgg
tttggtgcaaggatgattattcaagggcattacactgggggaactgtcattactgtcatt
gtcgctgtcttaactggttccatgtcattaggagaggcatcacctagcataagcgctttc
gcagcagggcaggcagcagcatacaagatgtttgagaccatcaaaaggaaaccagccatt
aacccttgtgaccctaagggaaaagtactagatgatatccatggagatattgaggtggta
gatgtttactttagctatccagtgaggcccaatgagcacatattcaatggattatctctt
tctatggcaaggggtacaaccacagctttagttggacaaagcggaagtggaaaatcaact
gttattagccttatcgagagattctacgaccctctttctggagaggttagaattgatgga
atcaacattaaagaatttcagctaaaatggattagggcaaagattgggcttgtgagtcaa
gagcctgtattgtttggttcatctatcagaaataacattgcatatggcagagatggtgct
acaactgaagagattagacttgctgctgagctggcaaatgcatctaagttcattgataaa
ttgccacagggactagataccttagttggtgagcatggaactcagctgtctggtgggcag
aagcaaagagtggccatagcaagggcgattttgaaaaatccaaggatacttctgttggat
gaagctacgagtgctcttgatgcagaatctgagaagattgtgcaggaagccttagacagg
ataatggtggaccgtaccactgtcgtagttgctcatcgcttgagtacaatcagagatgct
gatgtcattgcggtcattcaccaagggaagttggttgagaaaggttcacatgctgaactg
ctcaacgatccagagggggcatattctcaacttataaatctacaagctaaggaaagcagg
ccggtatcaagacagttgacaccgacacgatcatttatacgatcattcaacaaccgaaca
ttattgagcagcaacagtttctcattttcgccactaccagtagggtttgctgtaagtccc
ttaagagaacgtgaagatgatctttttccaccgtcaaaagaacaccctaaagtttcagtc
aagtatctcgcctctctaaataagcctgaaatcccagcccttattcttggatcactctcc
gccattataagtggcttagtctacccaatatttggagtactcttttctggcattatcgca
atgttttacaaaccacctcatgagctgagaaatgacgcaaggttctgggctctaatgttt
ctagcctttgggttggtatccctactgtcaaatccagcccgcggttatttttttgctgtg
gccggagggaggttgatacagagaattagggcaatgtgctttgaaagggtagtccgaatg
gaagttggttggtttgatgaggtagaaaattcaagtggtgctattggtgccaggctgtct
tcggatgctgcaagtatacgggctttggttggagacgcatttggcctgcttgttcagaat
atttctactgcaatcgctggtttgctgattgcattccttgctaactggatgttagcgttt
attgtactggctttgatccctcttatcggaattaatggttatttgcaactcaagttcacc
cagggattcagtgcagatgctaagaaaatgtacgaggaggcaagccaagttgcaagtgag
gcagtcggaagtatgagaacagttgcttcgttctgtgctgaagagaaggtgatacaagtc
tatgaggagaaatgtaaaggccctgtgaaagctggcataaaaagaggactaataagtggg
gtcggattcgggatgtcctttgctttgctttatagtgtctatgcactcagcttctatgca
ggagcacagcttgttggccatggaaaagctacattttctgatgttttccgagttttcttt
gcgctaacaatgacagcagtaggaatgtcacaatcaagctcacttgctccggacactggc
aaagccaagagtgctgcatcctcagtttttgcgatactaaaccgcaaatctaagatagac
tcgagtgatgaaactggaaccaccttggacgaagtgaagggtgacattgaacttcaacac
gtcagcttcgcatatcccactagacctgatgttcaaatttttcaaggcctctgcttgagc
attcgttctgggaagaaagtggctcttgttggagaaagtgggagtgggaaatccacagtc
atatccttattacaacgattctatgacccggattctgggtgcatcaccctagatgggatt
gagattcagaagtataagttgaagtggctaagggaacaaatgggacttgtaagtcaagag
cctagtctatttaacgacacaattcgtgccaatattgcttatggaaagggcgggaatgcg
acagaggctgagatcattgctgcttcagaaaaggctaatgctcacaaattcatctgtagt
ctggaacagggatatgatacattagttggtgaacgaggagtacaattgtcaggagggcag
aagcaacgagttgccatagcacgagctatagtaaaaaacccgagaattctattgttagat
gaagctacaagtgcacttgatgccgagtctgagaaagctgtgaaaaatgctcttgaacaa
gtcatgattaaccgaactacagtcattgttgctcataggttatccaccattaagaatgct
gatgttattgcagtggtgaaaaatggggttattgctgaaagaggaaatcacgagaaatta
attcgtatcaaagatggagcgtatgcgtctttagttgctgttcatacgaatgcatcctcg
tcttga
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integrated database retrieval system
