Silene latifolia (white campion): 141646792
Help
Entry
141646792 CDS
T11116
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141646792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141646792
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141646792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
141646792
NCBI-ProteinID:
XP_074310850
LinkDB
All DBs
Position
3:3464039..3468664
Genome browser
AA seq
462 aa
AA seq
DB search
MERDLGKLFIGGISWDTDENRLREYFGHYGEILEAVIMRDRITGRARGFGFIVFADAVVA
ERVVMEKHIIDGRTVEAKKAVPRDDYQILNKNSNSIQGSPGLGRTKKIFVGGLASTVTET
DFKNYFDEFGNIIDVVVMYDHTTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR
AVPKELSPSPNRSPLVAYNYGMGRAINPISNHAQRYNPSSIGGYSRFNPLVTGQNGLPPL
GNFGYGMGMGMGIGLDQGTNAGYNANSNLTDNHNYGRILGPYFNGNSNRYSTPIGYNGGS
ARGESLGSLGSRNLWGNDSFGNPTDPIIPANFLNSSNGNFGVSHGNGESNWGLDQTGGND
SGYSMGNLGNGFLDNGYGLGSGNYGRSHVMEQSHASSYGDLHRSASAYGDNTWSSGSPDL
DVSTPFGFGISTTSENVSSNTSGDFIGRYSAINRQANRGIAA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagatctcggtaagctttttatcggcgggatctcatgggatactgatgaaaat
aggcttagggagtattttggacattatggtgaaatattggaggctgtgattatgagagat
cgtattactggtcgtgctcgtggctttggtttcattgtttttgctgatgctgttgttgct
gagagagttgttatggagaagcatattattgatggccgaactgttgaagcaaagaaagct
gtcccaagggacgattatcagattctcaataaaaacagcaatagcattcaaggatctcct
ggccttggacgcacgaaaaaaatttttgtgggagggttggcgtcaacagtaacagaaact
gacttcaaaaactactttgacgagtttggtaacattattgacgttgttgtgatgtatgat
cacaccacgcaaaggccaagagggtttgggttcattacttatgattcggaagatgcagtg
gatagagtattgcataaaacgtttcacgaacttaatggaaaaatggttgaagttaagcgt
gctgtcccaaaagagttgtcaccaagcccaaaccgcagccctctagtagcatataattac
ggcatgggtagggctatcaaccctattagtaatcatgctcagcgctacaaccctagcagt
attggaggatatagtagattcaatccacttgttactggtcaaaatggacttcccccgctt
ggcaattttggatacggaatgggtatgggtatgggtatcggtttggaccaaggaacaaat
gctgggtataatgcaaattccaatttaacagacaatcataactatggtcggattttggga
ccttattttaatggcaactcgaataggtatagcactcctattggttataatggcggtagt
gcaagaggcgagtctctcggtagcttgggatcacggaatctttggggaaatgattctttt
ggtaatccgactgatcccatcatcccagccaatttcttgaattctagtaatggaaacttt
ggagtttcacacggaaatggagaatcaaactggggtttagatcaaactggtggtaatgat
tctggatatagtatggggaatctcgggaatggctttctcgataacggttatggtttgggg
agtgggaactatgggagatctcatgttatggagcagtctcatgcttcatcgtatggagac
ctacatcgtagtgcgtcagcctatggtgacaatacgtggagttctggttctcctgatttg
gatgtctctactccatttggttttggtatcagtactaccagcgaaaatgtttcttctaat
acctctggagattttatcggaagatatagtgcgataaatagacaagcaaatagaggaatt
gctgcatag
DBGET
integrated database retrieval system
