KEGG   Silene latifolia (white campion): 141646898
Entry
141646898         CDS       T11116                                 
Name
(RefSeq) uncharacterized protein LOC141646898
  KO
K12857  Prp8 binding protein
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141646898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slaf03041]
    141646898
Spliceosome [BR:slaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    141646898
 Complex C
   U5 SnRNP specific factors
    141646898
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 WD40_like RMC1_N KNTC1_N
Other DBs
NCBI-GeneID: 141646898
NCBI-ProteinID: XP_074310990
LinkDB
Position
3:complement(5048267..5051820)
AA seq 347 aa
MMLATTNNSESALSVAGPRPGMEWSAVPYNAPQAPGTNGRQRTSSLESPIMLLTGHQSAV
YTMKFNPAGTVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAILDLHWTTDGAQIISASP
DKTVRAWDVETGKQIKKMAEHSSFVNSCHPARRGPPLVVSGSDDGTAKLWDMRQRGAIQT
FPDKYQITAVSFSDASDKIYTGGIDNDIKVWDIRKNEVTMTLQGHTDMITGMSLSADGSY
LLTNAMDSKLCVWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMV
YIWDTTSRRILYKLPGHTGSVNECVFHPKEPIVGSCSSDKQIYLGEL
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgatgctagctactactaacaatagtgaaagtgctctatccgtggctggtccaaggccg
ggaatggagtggtctgctgtaccatacaatgctcctcaggcgccgggtacaaatggaagg
cagcggacttcaagcttggaatcaccaataatgctattgactggtcatcaaagtgctgta
tacaccatgaagtttaacccggcaggtacagtagttgcatcaggttcacacgatcgagaa
attttcttgtggaatgtccacggagactgcaaaaatttcatggttttgaagggacataag
aatgctatccttgatcttcattggactactgatggggcccagatcatctcagccagccct
gataagacggtgagggcatgggacgttgaaactgggaaacaaattaagaaaatggctgaa
cattcttcgtttgtcaattcatgtcatccggctaggaggggcccacctcttgttgtgagc
gggtctgatgacggcactgcaaagctgtgggacatgcgccagagaggcgctatccagaca
ttcccagacaagtaccaaatcacggccgtgtccttctccgatgcatccgacaaaatctac
acaggcggaatagacaacgatatcaaagtatgggatatccgcaaaaacgaggtgacaatg
acccttcaagggcacacagacatgattaccggcatgtcccttagtgcagatgggtcttat
ctcttgactaatgccatggattccaagctttgcgtatgggacatgcgcccatacgcccct
cagaaccgatgtgtcaaggtcctagaaggccaccagcacaactttgagaagaacttgcta
aaatgtggatggtcccctgatggtagtaaagtcactgccggaagttctgatagaatggtt
tacatttgggacacaacatctcgtcgtattctgtacaagcttcctggtcatactggctct
gtgaacgaatgtgtcttccacccgaaggagcctattgttggttcgtgcagtagtgataaa
cagatttatctcggagagctataa

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