Silene latifolia (white campion): 141646920
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Entry
141646920 CDS
T11116
Name
(RefSeq) transcription factor ILR3-like
KO
K28357
basic helix-loop-helix transcription factor family protein
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slaf03000
]
141646920
Transcription factors [BR:
slaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141646920
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GFIT
Motif
Pfam:
bHLH_IRO3
HLH
CCDC113_CCDC96_CC
Rootletin
HAP1_N
TMF_DNA_bd
MAD
DUF3740
LRRFIP
ZapB
COG3_N
HAUS-augmin3
THOC7
FBF1
Leu_zip
COG6_N
YabA
Cluap1
APG6_N
TPR_MLP1_2
AAA_23
SKA2
Tektin
Tmemb_cc2
Seryl_tRNA_N
YwqH-like
DUF3450
ERM_helical
CENP-F_leu_zip
DUF4140
Mod_r
DUF7491
BRE1
Spc7
Cep57_CLD_2
UPF0242
GAS
TMF_TATA_bd
TMPIT
FapA
DUF4337
Macoilin
CorA
DUF7801
FUT8_N_cat
Ax_dynein_light
PCRF
PRKG1_interact
AAA_13
Motif
Other DBs
NCBI-GeneID:
141646920
NCBI-ProteinID:
XP_074311023
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Position
3:complement(5423498..5426760)
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AA seq
237 aa
AA seq
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MSEENPDFLLYDCNSLMDENFVLDCNFTSPNSAFNYPLQPFNASAFNLSAELDGNYGDSV
GTKENTSKKRGRSDSCGPSSSKACREKARRDRLNDKFVELGTILEPGRAPKTDKAAILND
AVRMLTQLRTESQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKTEKDKLEQQLKTANTQ
PGYFPPHAPIPAAFGPPPQAPGKLVPFMGYPGVAMWQFMPPAQVDTSQDHALRPPVA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaaacccagattttttgttgtatgattgcaattctttaatggacgaaaat
tttgttcttgattgcaattttacttcccctaattctgcctttaattaccctcttcaaccc
tttaatgcctctgcttttaatcttagtgcggaattagatggaaattacggagactctgtg
gggaccaaggagaatacctcaaagaagagagggagatctgattcttgtggtccgtctagc
tctaaagcttgtagagagaaggcacgtagggaccgcctcaacgacaagtttgtggagtta
ggcactatactggaacctggtagggcacctaagactgacaaggcagccattttgaacgat
gctgtccgaatgctgacgcagttaagaaccgaatcccagaagttgaaagactctaactca
agtctacaagagaaaattaaggaattgaaggctgagaagaatgagctgcgtgacgagaag
cagaggctgaagaccgagaaggacaagctagagcagcaactgaaaacagcaaacacccaa
cccggatacttcccaccccacgctccgatcccagctgcattcggcccacctcctcaagca
cccggcaagttggtaccatttatgggataccctggagttgcgatgtggcagttcatgcct
cctgctcaagtcgacacatctcaggatcacgcgcttcgaccaccagtcgcttaa
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