Silene latifolia (white campion): 141647048
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Entry
141647048 CDS
T11116
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00541
Biosynthesis of various nucleotide sugars
slaf01100
Metabolic pathways
slaf01250
Biosynthesis of nucleotide sugars
Module
slaf_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
141647048
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
141647048
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
141647048
NCBI-ProteinID:
XP_074311185
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Position
3:8374897..8379293
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AA seq
672 aa
AA seq
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MTTHTPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLRPSQSSPNFK
FVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVILH
KGEVGHVYNIGTKRERRVLDVAQDVCKLFSMDSEKVIKFVENRPFNDQRYFLDDEKLKEL
GWSERTPWEEGLKKTMEWYLSNPEWWGDVSGALLPHPRMLMMPGGIERHFEEADKDNSGE
LPSIQSKTVVPVAKSNASQKESSYKFLIYGRTGWIGGLLGQMCDKQGIAYEYGKGRLQDR
ASLIADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVVGTLTLADVCKEHGLLMM
NYATGCIFEYDAAHPLGSGIGFKEEDTPNFMGSYYSKTKAMVEELIKEFDNVCTLRVRMP
ISGDLSNPRNFVTKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSH
NEVLEMYKNYIDPSYTYANFTLEEQAKVIVAARSNNEMDASKLKGEFPELLSIKDSLIKY
VFEPNKKTNYSA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactactcacacgccaaagaatattttaataaccggagcggccgggttcatcgcatct
catgttgcgaaccggctagttaggagttaccccgattacaagattgtcgtgctcgacaag
cttgattattgctcaaacctcaaaaatttgcgcccttctcaatcatcccctaatttcaag
tttgtcaagggggacattgctagtgccgatcttgttaactaccttctcatcaccgagtcc
attgatactatcatgcactttgctgcacaaacccatgttgacaactcttttggtaacagc
tttgagtttactaagaacaacatatatggtactcatgtccttctagaagcgtgtaaggtc
acgggacaaatcaagaggtttattcatgttagtactgatgaggtttacggagagacagat
gaagatgctgttgtcggaaaccatgaagcttctcagcttcttccaacaaacccgtattct
gctacaaaagccggagctgagatgcttgtgatggcttatggccgatcttatggattgccg
gttattacaacccgtggaaacaatgtgtatggacctaaccaatttcctgagaagttgatc
cctaagttcatccttttagccatgagagggaagcctctcccgatccacggagacgggtct
aatgtgcgaagttacctctactgtgaggatgtggcagaggcctttgaggtcattctccac
aagggagaagtaggccatgtgtacaatattggaaccaagagggagaggagagtccttgat
gtcgctcaagacgtatgcaaacttttctccatggattccgagaaggtcatcaagtttgtc
gagaatcgtccctttaacgaccagaggtacttcctggatgacgagaagttgaaggaattg
ggatggtcagagcgtaccccttgggaagagggtttaaagaagactatggagtggtactta
agtaatcccgagtggtggggtgatgtgtcaggagcgctccttcctcacccgaggatgctg
atgatgccaggtggcattgagaggcattttgaggaagctgacaaggacaattccggggag
ctccccagtattcagagcaagacggtggttcctgttgccaaaagtaacgcctctcagaaa
gaatcatcatacaaattcttgatttacggtagaactggttggatcggtggtctccttggt
caaatgtgtgacaagcaaggcattgcttacgagtatggaaagggtcgtctgcaagacaga
gcatctctcattgccgatatccagaatatcaaacctacacatgtcttcaatgctgccggt
gttactggtaggcccaatgttgactggtgtgaatctcacaaaactgagacgatccgcacc
aatgtggttggtactttgacgttggctgatgtctgcaaagaacacgggttgcttatgatg
aattatgctactgggtgcatttttgaatatgacgcagcacatccactgggttctggaatc
gggtttaaggaggaagacacccccaatttcatgggttcctactactcgaagactaaagct
atggtggaagagttgatcaaggaatttgacaatgtttgcacccttagggtccgaatgccc
atatccggtgacctcagcaacccacgtaacttcgtcacaaagatatctcgctacaacaag
gtagtcaacatccccaacagcatgaccattttggacgagcttctgcccatttccatcgag
atggccaaacgtaatctcagaggcatatggaacttcacaaacccgggtgtagtaagccac
aatgaggttctcgagatgtacaagaattacattgacccgagttacacctatgctaacttc
actttggaagagcaagccaaggtcattgtcgccgcaagaagcaacaatgagatggatgcc
tccaagttgaagggcgaattcccagagctcctaagcatcaaggattcattgatcaagtat
gttttcgagccaaacaagaaaactaactactccgcttga
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