Silene latifolia (white campion): 141647076
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Entry
141647076 CDS
T11116
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141647076
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141647076
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141647076
Peptidases and inhibitors [BR:
slaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141647076
Ubiquitin system [BR:
slaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141647076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
141647076
NCBI-ProteinID:
XP_074311213
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All DBs
Position
3:8990171..8996180
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AA seq
675 aa
AA seq
DB search
MVGFLLMEAEGVGGERGKIQMNWISNLLKRKNGGPLGLRNLGNTCYLNSVLQCLTYTPPL
ANFCLGNQHSTYCDSAANPFRKKQCPFCLLENRIVRSLSIDLTLDAPAKILSCLEIFSEN
FKSGRQEDAHEFLRYVIDACHDTCLRLKKLQQQRSKKTSNGIGKENFGSSTIVKDIFGGA
LQSQIKCLSCGNESNKVDEIMDICLEISGCSSLKEAMRKFFQAESLDGNNKYKCERCTKL
VTAKKQMSLLQAPNVLVVQLKRFEGIFGGKIDRVIAFEEILVLSSFMCKASQDPNPEYTL
FATIVHSGFSPESGHYYAYIKDAVGRWFCCNDSYVTLSTLQEVLTEKAYILFFTRTSQRP
VSVDTTTMSNGVKSHTIATVPNGLEFHAVATVSNGVKPHARNGNIMCKSPKSTAFPKAVN
MKPFNVRPVSKVAPVASKVNGASSALQNKSNGHANSFAGKDSPSDPGSHNLQKKESVECD
GNIGHVVSERVNGNGICSQDNQSCVDGKQNTIKSSQDVGNGNSHIENGHVGSEKDLHKDN
SLKDKIVGKMPVNGDAHSGLNNGRVSVSGSKRKLEDKDTCILLAKDAHSRTQVEHFKEVL
HKEASLSLQASGWSDKLYQYMRSRKRLCMDTCTSTDTIEQKKALIAEAKTSFISQIPGSL
KLSLIERIKSFSRGN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggtcggtttcttgttaatggaagcagaaggtgttggaggagaaagagggaaaattcaa
atgaattggatttcgaacttgcttaagcgtaaaaatggcggtcctctagggttaagaaat
ctcggaaatacctgttatcttaattctgttcttcagtgtcttacttacactcctcctctt
gctaatttttgcctgggaaatcaacattctacttattgtgattcggctgcaaatcctttc
agaaaaaagcagtgtcccttttgtttattagagaaccgtatagtacgatcgcttagtata
gatttaaccctagacgctcctgctaagatccttagctgccttgagatattttctgagaat
ttcaagagtggtagacaagaggatgcccatgagttccttcgctatgttatcgatgcatgc
cacgatacttgcctgcggctgaagaaactgcagcagcagcgttcaaaaaaaacctccaat
ggtattggaaaagagaattttggtagcagtactattgtgaaggacatttttggtggtgct
ttgcagagtcaaataaagtgcctttcatgtggaaatgaatcgaataaagtcgatgagatc
atggatatttgtcttgaaatatctggttgcagttcgcttaaagaggcgatgagaaaattt
ttccaagctgagagtttagatggtaataataagtacaaatgtgagagatgtacaaaacta
gttacagctaagaagcaaatgtcgctactccaagctcctaatgtacttgtcgtccagctc
aagagatttgagggaatttttggtgggaagatagatagggtgattgcatttgaagaaatt
ttggttctttcaagcttcatgtgcaaagcaagtcaagatccaaatcccgagtatactcta
tttgctaccattgttcattctggtttttcacctgaatctggacactattatgcttacatt
aaggatgctgtaggacgttggttttgctgcaacgattcttatgtaacattatcaaccctg
caagaagtgctgacagagaaggcatatattctcttctttacccgaacaagccagaggcct
gtttcagttgatacaacgacaatgtctaatggtgtgaaatctcatacgatagctactgta
cccaatgggttggaatttcatgcagtagctactgtgtctaatggagtaaaacctcatgcg
cgtaatggcaacatcatgtgtaaaagtcccaaaagcactgcttttccaaaggcagtgaac
atgaaaccattcaatgtgcgtcctgttagcaaagttgctccagttgcaagtaaagtcaat
ggtgcatctagtgctctacagaacaagtctaatgggcatgcaaattcttttgccgggaaa
gattctccgagtgacccagggtcgcataaccttcagaagaaggaatctgtggaatgtgat
ggaaatatcggccatgttgtgagtgagcgtgtgaatggaaatggtatatgttctcaggac
aaccaaagctgtgttgatgggaagcagaatactatcaagagtagccaggatgtgggaaac
ggaaacagccatatcgagaatgggcatgttggctctgagaaagatctgcacaaagacaac
tctctgaaagacaagattgttggaaagatgcctgttaatggtgacgcccatagtggtttg
aataatgggcgagtgagtgtttctggctccaagcgaaagttggaagataaggatacttgc
attttgctcgccaaagatgctcattctcggactcaagttgaacattttaaggaagttctt
cacaaagaagcttcattgtctcttcaagcatctggctggtctgataagttgtatcaatac
atgagatcaaggaagagactgtgtatggatacttgtacgtcaacagataccattgagcag
aagaaagcgttgattgctgaggccaaaacatctttcatctcccaaattcctggatctttg
aaattaagtttgattgaacgtattaaatcgtttagcagaggaaactag
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