Silene latifolia (white campion): 141647191
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Entry
141647191 CDS
T11116
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
slaf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141647191
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141647191
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141647191
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141647191
03036 Chromosome and associated proteins [BR:
slaf03036
]
141647191
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
141647191
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
141647191
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
141647191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Phage_Inh_C
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
141647191
NCBI-ProteinID:
XP_074311392
LinkDB
All DBs
Position
3:11426756..11440759
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AA seq
538 aa
AA seq
DB search
MDFNGDLLSLDAESLQLPEVSPFALKSTPYLAQELFEQWLSLHDTIRLVKTLVSEAKAGN
PLNVAANASSANVAATNSVPSMFSAGSAPPLSPRSSSGSPRIMKQKNNGLSSLGRPLKML
SETVKEFIPQFYFQNGRPPCKELKERCLFRINQIFYGHTEGLQMNEFKVITKEICKLPSF
LSPILFQKIDINAAGFVTRDAFVDYWINDNLLTVDIATQIFTIMKQPDNMFLTQDDFKPL
IRELLATHSGLEFLQNTPEFQDRYAETVIYRIFYYINRAGNGKLTLRELKRGNLIAAMQH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYKIVDRIFS
QVPRKFTSTVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCVDLDGNGVITRNEMQFFYE
EQLHRMECMGQEPVVFEDILCQIIDMIKPENGSFVTIRDLKGSKLSGNVFNILFNLNKFM
AFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEEASNGSAEVWDESLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaatggagatttgttatcattagacgcggaatcgttacagcttccagaagtt
tcgccatttgcattgaaatcaacaccgtaccttgcgcaagagcttttcgaacaatggctt
tctcttcatgatactattcgtctggtcaaaacattggtcagtgaagcaaaggcagggaat
ccattaaatgttgctgcaaatgcttccagtgcaaatgtcgctgccaccaactctgtacca
tcaatgttttctgccgggagtgcaccgccactgtcgccaagaagctcatcaggctctcct
cggatcatgaaacagaagaataatgggctttcttctcttggacgtcctctaaagatgctg
agtgagaccgtgaaagagttcataccacagttctatttccagaatggccgtccaccctgc
aaggaactgaaggagcgatgcttgtttagaataaatcaaattttctacgggcatacagag
ggcttgcaaatgaatgagtttaaggtcattacgaaggaaatttgcaagctgccttctttt
ttatctcccatcctcttccagaagattgatatcaatgctgcaggattcgtcactagggat
gcatttgttgattactggatcaatgacaatctcttgactgtggacattgcaacacaaatt
tttactattatgaagcagccagacaacatgtttctgacgcaggatgactttaagcctctt
atccgagaacttttggctacccattctggattggaattcttacaaaacaccccggagttt
caggacagatatgcggagactgtaatatatagaatcttctactacattaatagagcggga
aatggtaaacttactctcagggagctgaagcgtgggaacttgattgctgctatgcaacat
gctgatgaagaagaggatatcaacaaagtgctgaggtacttctcatatgagcacttctac
gtgatatattgcaagttctgggagttggatacagaccatgatttcttgattgacaaagag
aacctaatcagatacgggaaccatgcacttacctacaagattgttgatagaattttttca
caggttccaagaaagttcacaagtactgttgaaggcaagatgggatatgaagattttgtg
tacttcatactggcagaggaggacaaatcatcagaacccagccttgaatactggtttaag
tgcgtagacttagatggcaatggagttataacaaggaatgagatgcagttcttttatgag
gagcagttgcatcgtatggagtgcatgggtcaggagcctgtagttttcgaagatatctta
tgccagattatcgacatgattaaaccagagaatgggagttttgtcacaattcgtgatctg
aaagggagtaaactttcagggaatgttttcaacatactctttaacctaaataagttcatg
gcgtttgaaactcgcgatcctttccttattcgccaggagagggagaatccaaccttgacg
gaatgggatcgatttgcacatagagagtacattaggctttcaatggaagaggacgttgaa
gaagcttctaatggaagtgctgaagtttgggatgaatctctagaggctcctttttga
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