Silene latifolia (white campion): 141647278
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Entry
141647278 CDS
T11116
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141647278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141647278
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141647278
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
F-box_4
Motif
Other DBs
NCBI-GeneID:
141647278
NCBI-ProteinID:
XP_074311502
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Position
3:complement(14887681..14893514)
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AA seq
601 aa
AA seq
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MELTKSLKTTPYPPKTTTSFPEEVLEHVLSFIESHSDLNSVSLVCKTWYEVDRWCRRKIF
IGNCYSVDPTYVIRRFKDVRSLTIKGKPHFADFNLVPDGWGAHSFPWIYGFSVGFPGLEE
LRFKRMVVTDEGLELIGSKLRNFKVLVLCSCDGFSTNGLASIAANCRNLRTLDLCESEVD
DRSGNWISDFPDTYTSLESLNIACLSSELRFCSLERLVARCPNLKSLRLNRAVPLEKLAI
LLEKAPQLVNFGTGSFLTELSTEAYSKLTKAFAGCKSLKGLSGLYDVVPNYLPSLYPACS
GLTSLNLSYATIHSPDLIDLVSHCPSLQRLWVLDYIEDSGLEMLAQTCKDLRELRVFPSE
PYIQEPNVCLTEQGLVSVAMGCPKLQSILYFCRQFSNEALCTIAKNRPNLTRFRLCIIEP
QSPDYLTNEPLDDGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTHAKKLEMLSLAFAGES
DLGLHYLLSGCKNLRKLEIRDCPFGGKALMMNAAKLETMRSLWMSSCQVSYEECKLLGKK
MPGLNVEVMDERGLSDYSQTNDCPIDKLYIYRSLVGPRADSPAFVLTMNENTGPEVMVDN
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaactcacaaaatccctcaaaacgacaccgtatccacccaaaaccacaacttcattc
ccagaagaagtcctagaacacgtactatccttcatcgagtcacactcagacctcaactca
gtctcactcgtttgcaagacatggtacgaggttgaccgttggtgtcgtcgtaaaatattc
atcggtaactgttattctgtggaccccacttacgtgatccgtagatttaaggatgttaga
tcacttactattaaaggaaagcctcattttgctgattttaatcttgtacctgatggatgg
ggtgctcattcttttccttggatttacgggttttcggtcgggtttccgggtttggaggag
cttcggtttaagagaatggtggttactgatgaaggtcttgagttgattgggagtaaactg
aggaattttaaggttcttgttttgtgttcctgtgatgggttttctactaatggcttggct
tctattgctgctaattgcaggaatttgaggactctagacttgtgcgaaagtgaagttgat
gaccggagtggaaactggataagcgatttcccggacacttacacatccttagagtctctt
aacatcgcctgcctaagctctgagctgagattctgttctcttgagcgtttggttgccagg
tgtccgaatctaaaatcacttaggcttaaccgtgctgttcctttagagaagctggcaatt
ctcttggagaaggctcctcaattagttaactttggcacaggctcgtttttgactgagctc
agcaccgaagcctattcaaagctcacaaaagccttcgctgggtgcaagagcctcaagggc
ctttcaggcctatatgacgtggtgccaaattatcttccatccctttatcccgcttgctcg
gggcttacctcgttgaacctgagttatgccaccattcactcccctgatttaatcgacctt
gtgagtcactgtccgagtctccaacgtctttgggtacttgattacatagaagacagtggt
cttgaaatgcttgctcagacttgcaaggacttgcgagagttgcgggtattcccatctgag
ccatacattcaagaaccgaatgtttgcttgacggaacaaggcctagtttctgttgcaatg
ggttgccctaaacttcagtcgattctatacttctgtcgccaattttccaatgaagcattg
tgtaccattgccaagaatcggcccaacctaacccgcttccggctgtgcattatcgagccc
cagtcccctgattacctaaccaacgaacccttggacgacggttttggtgctattgtcgag
cactgcaaggatttaagacgactttccttgtctggcttgctcacagaccgtgtattcgag
tacattggcacacatgccaagaagctcgagatgctctctcttgcctttgctggagagagt
gatttgggtcttcattatcttctatccgggtgtaaaaatcttcggaagctcgagattagg
gattgtccttttggaggaaaagcgcttatgatgaacgcagcaaagttggagacaatgcga
tccctttggatgtcttcgtgccaggtgagctacgaggagtgtaaactgcttggcaagaag
atgccgggattgaatgtcgaggttatggacgagagagggctttcagattattctcagacc
aacgactgcccgattgataaactttatatctaccgctcacttgtggggcctagggccgac
tctccggcttttgtgttgactatgaatgaaaacacaggaccagaagtaatggtagacaat
gaataa
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