Silene latifolia (white campion): 141647465
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Entry
141647465 CDS
T11116
Name
(RefSeq) pleiotropic drug resistance protein 3-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
slaf Silene latifolia (white campion)
Pathway
slaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141647465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slaf02000
]
141647465
Transporters [BR:
slaf02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
141647465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_25
RsgA_GTPase
AAA_22
AAA_16
AAA_29
Rad17
AAA_18
AAA
AAA_30
AAA_28
NACHT
AAA_14
nSTAND3
AAA_5
Viral_helicase1
AAA_11
ORC-CDC6-like
T2SSE
RNA_helicase
RuvB_N
ATPase_2
AAA_19
AAA_7
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
141647465
NCBI-ProteinID:
XP_074311760
LinkDB
All DBs
Position
3:28374886..28387347
Genome browser
AA seq
1133 aa
AA seq
DB search
MANCDDQDETRSLEYELVELSFPGLGSSSRRNSSIASSRDAFDEEHIKKWAKIERLPTYE
RSKVFLLDEHDDESTVIGKRMIDVSMLGPLERHLFIEKLIKQIEQDNLRFLQKLKKRVDK
IGLKFPAIKVKYVNLSVDAKCKVVDGKPLPTLWNTLKSSFSIISKLLGSELQEAKLSIIK
DVSGIIKPRRMTLLLGPPGCGKTTLLLSLSGNLDRSLQKKGHIEYNGCKLEDFVPQKTSA
YISQHDMHIPEMTVRETIDFSARCQGVGSRADIMVEVCRREKQEGIVPDPDIDAYMKAIA
VEGLKSSLQTNYILKILGIDVCADIITGDAMRRGISGGQKKRLTTGEMIVGPTKALFMDE
ITNGLDSSTAFQTVSCIQQLVHITDATALVALLQPAPETYDLFDDVIFMSEGKIVYHGPS
NRAVEFFENCGFSCPQRKGVADFLQEVISRKDQAQYWCRSEPYTFTSVDVFCEKFKASPF
GKSLFEEVSQSHVKTEADDRAIAFCKFSLPKWELFKTCLSREFLLMRRNSFIYIFKTIQL
IIMALVTMTVYWHTRLRIDILHANYYMGAMFYGLVILLVDGFPEMAMTIMRLPIFFKQRD
LYFYPAWAYAVPATILKMPLSILLAFVRTSLTYYTIGYTPEAGRFFRQALLYSGVHLTSM
SSFRLLASVFQTIAASTFASAIFIFFMFIFSGFIIPRSSVPVWLNWVFWFTPLAYGEIGL
SVNEFLAPRWQKLLSSNTTIGQEILQSRGLLFDDYYFWVSIGALTGIFVLSTIGFILALT
FLKAPGSSTAFISREKLSKLQGRKDPSSDDYSDFKESSFKSSLEFQNRNIILPFEPLSVT
FHNVQYYIDTPMEMKERDFSEKKLQILKDITGAFRPGVLTALMGVSGAGKTTLLDVLSGR
KTSGTIEGEIRIGGYPKVQETFARISGYCEQTDIHSPHITIEESLIFSAWLRLPNSIDSK
TKTEFVNEVLETIELNEVRDALVGLPGMYGLSTEQRKRLTIAVELVANPSIIYMDEPTTG
LDARAAAIVMRAVKNVVITGRTVVCTIHQPSIDIFEAFDELLLLKTGGRMIYSGPLGQHS
SRVIEYFQDIPGIPKIRDNYNPATWMLEVTSASSEIDISADFAEVYRDSALYK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattgtgacgatcaggatgaaactaggtctcttgaatatgagttagtagagcta
tccttccccggtctagggtccagttcgaggagaaattcgtccattgcctcttcaagagat
gcctttgatgaggagcacattaaaaaatgggctaaaattgagagattaccgacatatgaa
cggtcaaaggtttttttgttggatgaacatgatgatgaaagcacggttattggaaaacgg
atgattgatgtctccatgcttggacctctagaacgacatctttttattgagaagctcatt
aaacagattgaacaagataaccttcggtttttgcagaaacttaagaagagagtagataaa
attggtttgaaatttcctgctatcaaggtgaagtatgtaaacctctccgtggatgctaag
tgcaaggttgtcgatggaaagcctctcccaactctctggaacactctgaaaagcagtttc
tctatcatttcgaagttactggggtctgagctgcaggaagcaaaactaagcattatcaag
gatgtcagtggtataatcaagcctagaaggatgactctgttacttggtcctccgggatgt
ggaaagaccaccctcctattgtcactctctggaaatctggacagatctctacagaaaaaa
ggacacattgagtacaatgggtgtaaactggaggactttgtgccacaaaaaacttctgct
tatattagtcagcatgacatgcacattcctgagatgaccgtgagagagacaattgacttt
tcagctcgttgtcagggtgttggaagtcgagcagatataatggttgaggtctgtagaagg
gaaaagcaggaaggaattgttccagatcctgatatagatgcatatatgaaggcaatcgct
gttgaagggcttaagagttcccttcagacgaactacattttgaaaattcttgggattgat
gtgtgcgctgacataataactggtgatgctatgaggcgaggcatctcaggtggtcaaaaa
aagcgattaactacaggtgaaatgattgttggaccaacaaaggcattatttatggatgag
ataacaaatgggttggacagttccactgcctttcagactgtttcgtgcatccaacaatta
gttcatatcacagacgctacagcacttgttgccctccttcagccagcaccagaaacctat
gacctgtttgacgatgtcatcttcatgtcagaaggaaaaattgtataccatggacccagc
aatcgtgctgtagaattctttgagaactgcggttttagttgtccacaaaggaaaggagtg
gctgactttctccaggaggttatttcaagaaaagatcaggcgcagtactggtgtcgtagt
gaaccttatacctttacctctgtcgatgtgttctgtgagaaatttaaggcatctccattt
gggaaaagtctatttgaggaggtttcacagtcacatgttaagacagaagctgacgataga
gctattgccttctgcaagttttctctacctaaatgggaactcttcaaaacttgtttgtcg
agagaattccttcttatgaggagaaactctttcatatacatatttaaaactattcagttg
atcatcatggcactggtgacaatgactgtatactggcatacgagattgcgtattgacatt
cttcatgccaactattatatgggtgctatgttctatggccttgtcatacttcttgttgac
ggatttccagaaatggcaatgacaatcatgaggcttcccattttcttcaaacagagagac
ctctatttttatccagcttgggcatacgcagtcccagccactattctgaagatgcctctt
tccattttgcttgcttttgtcaggacatcactcacctactacacaattggctatactcca
gaggctggaaggttctttcgtcaagcccttctatattctggagtgcacttgacatcaatg
tcctcgttccgtttgttggcatcagtgttccaaaccatagcagcatccacatttgcttct
gctatctttattttttttatgttcatcttcagcggatttataatcccacgatcatctgta
ccagtttggttgaattgggttttctggttcacaccgctagcatatggggagataggccta
tctgttaatgaatttctagctccaagatggcagaagttgctttcgtccaacacaacaatc
ggtcaagaaattcttcaatcacgtggactactctttgatgattactatttttgggtttca
attggtgctcttaccgggattttcgtactttctaccattggatttatcttagcattaact
ttcttgaaggctccggggtcatccacagcttttatctcgcgagaaaagctatctaaacta
caaggacggaaagatcccagcagtgatgactatagtgattttaaggaaagcagtttcaag
agtagtttggaatttcagaacaggaatataattttgccctttgaacccctttcagtgaca
tttcacaacgtgcaatactacattgacactcctatggaaatgaaagaacgggacttttca
gagaagaagcttcaaatactcaaagatatcacaggagcttttaggccaggtgttctcaca
gcgctaatgggtgtgagcggggctggaaaaacaactctgcttgatgttctctctggacgt
aagactagtgggactattgaaggtgaaattagaataggagggtatcctaaagtacaggag
acatttgcccgcatatctggttactgcgaacaaactgacatacattctcctcacattacc
atagaagaatcacttatcttttcagcttggcttcggcttcctaacagcattgattcaaag
accaaaactgaatttgtgaatgaagtccttgaaactatcgagctcaacgaagttagagat
gctttagtaggcctacctggtatgtatggtttatcaactgagcaacgcaaacggctcact
attgctgtagaacttgtggccaacccatcaattatatatatggatgagccaacaaccggt
ttggatgcaagagcagctgccattgtcatgagagcagtgaaaaatgtggttattactggt
aggactgtcgtttgtaccatccatcaaccaagcattgatatatttgaagcatttgatgag
ttgcttcttttgaaaactggtggacgcatgatctattctggaccacttgggcagcattcc
agtagagtcattgaatacttccaggatattccaggcattccaaagatcagagacaattat
aatcctgctacatggatgctagaagtcacttctgcatcaagtgaaattgatattagtgct
gattttgctgaagtgtatcgtgactctgctttgtacaagtga
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