Silene latifolia (white campion): 141647507
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Entry
141647507 CDS
T11116
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141647507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141647507
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141647507
mRNA degradation factors
5'-3' decay
Decapping complex
141647507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
NLRX1_C
Motif
Other DBs
NCBI-GeneID:
141647507
NCBI-ProteinID:
XP_074311821
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All DBs
Position
3:31704539..31710998
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AA seq
362 aa
AA seq
DB search
MSHTGKLMPNLDQQGTKTLNLTVLQRIDPCILDILLTAAHVSLYEFNIDLNQWSRKDVEG
SLFIVRRNAEPWYQFIVMNRRNTENLVENLLGDFEYEIQKPYLLYKNAAQEVNGIWFYNT
RECEEVANLIDRIIDSYPRITSKPQLSNQSDFKELEPTPSMAVMEGPLEPPPVSANAAEV
NEIASSFTNFYTATNVVNNGSYSGRPVQTYHPSNHSTSIGLSNLAAAPTGPFEVPSTTTS
TPSVPPAHHQNATDPINKNIANLFKPPSFYIPHTSPVVSVPPVSSSLPSVASQPSLTLQR
PYGAPLLQPFPPPNPSPSLTPHTASTPTNGPVIDRDKVREALMTLVQDNQFIDMICRALQ
QV
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaccggaaaattaatgcctaatttggatcaacaaggcaccaaaaccctaaat
ctcaccgttcttcagcgtattgatccttgtattcttgatattcttcttactgctgctcat
gtttctctttacgaattcaacatcgaccttaatcaatggagtcgcaaggatgtcgaagga
tcgctcttcatcgtacgaaggaatgccgaaccttggtatcagttcatcgtaatgaatcgg
agaaacacagaaaatcttgttgagaacctcttgggagactttgagtacgaaattcagaaa
ccatatctcttgtacaaaaatgcagcccaggaagttaatggaatatggttttacaatacg
cgtgaatgtgaggaagttgctaatcttatcgacaggataattgactcatatccaaggatt
acgtctaagccacaactatctaatcagagcgatttcaaggaactggaaccaaccccttct
atggcagtgatggagggacctctggagccaccaccagtttccgctaatgcagctgaagtc
aatgagatcgcttcttcctttacgaacttttatacagcaacaaacgttgtcaacaatggc
tcatattccggaaggccagtgcaaacttaccatccatccaatcattcaacgtcaattggc
ttgtctaatctggcagccgctcctacgggaccatttgaagtaccgtctacaaccacatca
accccttctgttcctccagcccaccatcaaaatgctaccgatccaatcaacaaaaacata
gcaaatctttttaagccgccttcattttacattccacacacttcacccgtagtttcagtt
ccccctgtgtcgtcctctttgccatcagttgcatcgcagccttccttgacactacaacgg
ccatatggtgctccactgcttcaacctttccccccgccaaacccatcaccatctcttact
ccacatactgcctctaccccaacaaatggacctgttatagatagagacaaagttcgtgaa
gcgcttatgactcttgtccaggacaatcagttcattgatatgatatgcagagctctacaa
caagtatag
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