KEGG   Silene latifolia (white campion): 141647720
Entry
141647720         CDS       T11116                                 
Name
(RefSeq) protein PAT1 homolog 2-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141647720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slaf03019]
    141647720
Messenger RNA biogenesis [BR:slaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     141647720
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     141647720
SSDB
Other DBs
NCBI-GeneID: 141647720
NCBI-ProteinID: XP_074312116
LinkDB
Position
3:complement(71363943..71374296)
AA seq 829 aa
METARARCHGRPPTSNGSSSLLSAIDSPSFLPLNPQDNSLFDASQYAFFGQNVAEEVELG
GLDVDEDNHSLAGLPSDEYHLFDRDEGHDVGLGSLSDIDDLETTFSKLNRVVSGPRNPGV
IGDRGSGSLSRESSSAAEWSRDGWLDHTVSDVDIALESSRWSSHPNSSFSHSGEFNKPLY
RALSYPEQQLQQHQYLQQDFPSETLSTLKSSSFTSFPPPGGAPQPPLSHRHSLPLNFPSM
NTGLDSTFSAPNISPGISTAHGFGRSMPGVTHSQPRNQWSNHAGLLHGDHSRVLNNVLQQ
QLNHQNSLLYNSPLVSPRQHLFQQGLGQSVPSLAHLSFLQSQLIASHASAPSHLLRKYDS
MYGIAEMRDHQRSKSVRGKHHRFNRQGSDSSVQKEECIQFSSKYMTAEEIGSILKMQHTS
HSNDPYIDDYYHQASIAKKSSGLRLKPHFAPLHLRDVPSRSRNSGSDQHSHQSFDTLRRL
ALSSVRRPRPLLEVEPPSSGCSDGGKERRSLEQEPMFAARIAVEDAFTLLLDVDDIDRVL
RHNPPQDGGSQLRRKRQVLLEALATALQLVDPFGSGGSSVGPGDDIVFMRIVSLPKGCKL
LSKYVELVIVNPGPASELARIVCMGVFRHLRFLYGRLPTDATASEAIVKLAKVVSTCVGG
MDLRGLSACLAAVVCSTEQPPLRPLGSPTGDHASLILKAVLDRATELLNSPNPQASGSWS
VSSLSFWKASFGAFFTLITKYCVSKYDSIMQSMVNRSQPSSDITSSEAARAIRGEMPVEL
LRASLFHTDEHQRRMLMAFAHKSIPFPVTGFNLRDEENIGQINSESVRS
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggagactgctcgagctcgctgccatggccgccctcccacttccaatggatcttcttca
cttctctccgccattgattctccttcttttctcccccttaatccccaagataattcgctt
tttgatgcatcccaatatgcgttctttggtcagaatgttgctgaggaggttgagttggga
gggttagatgttgatgaagacaaccattctcttgctggattgccaagtgatgagtatcat
ttatttgacagagatgagggacatgatgtaggtttaggatctttgtctgatattgatgat
ctggaaactacattctccaagctgaacagagttgtgtcaggaccaaggaatcccggggtt
attggtgatagaggatctgggtcattgtcaagagaaagttcatctgctgcagaatggtca
cgggatggttggttagaccatactgtctcagatgtggatattgctttagaaagttcaaga
tggtcatctcatccaaatagctctttcagtcattctggagaatttaataaacctttgtac
agagcattgtcttaccccgagcagcagctacaacaacaccagtaccttcaacaagacttt
ccaagtgaaacgctgtcaacattgaagtcatcgtctttcacttctttccctcctccaggt
ggcgcacctcaacctcctttgtctcatcgccattcacttcctttgaattttccttccatg
aatactggtctcgactcaactttctcagcaccaaatatatctcctggaatatccactgct
catggatttggtcggagcatgccaggtgtcacacacagtcaacctcgaaaccagtggagc
aatcatgctggcctattgcacggtgatcattctagggttcttaacaatgtactgcaacaa
cagttaaatcatcagaacagtttgctgtataattctcctctggtgtccccccggcaacac
ttgtttcaacaaggactgggtcagtcagtaccgtcattagcacatttatcattcttgcag
tcccagctcattgctagccatgcttcggcaccttctcatcttttgagaaagtacgactcc
atgtatggcattgccgagatgagggatcatcaaagatctaagtcggtccgcggcaagcat
catcgtttcaatcgacaagggtccgactcttctgtccagaaggaagaatgcattcagttc
agctctaagtatatgactgctgaggagattggtagtatcttaaaaatgcaacatacttct
cacagcaacgacccctacatagatgattactaccaccaagcttctattgctaaaaagtct
tcaggattgaggctaaagcctcattttgctcccttgcatttgcgggacgtaccttctcgc
tcacgtaatagtggttctgatcagcacagccaccagtcgtttgatactttaagacggctt
gccttgtcatcagtccgtaggccccgcccacttcttgaagttgagcctccatcctcagga
tgtagtgatggtggcaaagaacggaggtcacttgagcaagaaccgatgtttgctgccaga
attgctgttgaggatgcttttacccttcttcttgatgtggatgatattgaccgtgttctt
cgtcataatccaccccaagatggtgggtctcagcttaggcggaagaggcaggtcttactc
gaagctttggcgacagcccttcagcttgttgacccgttcggcagcggggggagttcagtt
ggtccgggggatgatattgtattcatgcgcattgtttctcttccaaagggctgcaaactt
ctctctaagtatgttgagcttgtcatagtcaacccgggacctgctagtgagttggctcga
attgtctgcatgggtgttttccgccatttaaggtttttgtatggtcgtcttccaactgac
gccacagcttctgaggctatagtcaagcttgccaaggtcgtttcaacttgtgtcggtggc
atggatctccgtggtctaagtgcttgtcttgccgctgttgtttgttctactgaacagcct
ccattacgcccacttggaagccccactggggatcacgcctcgttaattttgaaggctgta
cttgatagggccaccgaactcctaaacagtcctaatcctcaagcctctggaagttggagt
gtttctagccttagcttctggaaggcttcatttggcgctttctttactttgattaccaag
tactgtgtgagtaaatatgactcgatcatgcagtcaatggtaaaccggtcccagccgagt
tcagatatcactagctcagaagcagcaagggctatacgaggggagatgcccgttgagctt
ttacgtgcaagtctctttcacaccgatgaacatcaaaggaggatgttgatggcctttgct
cacaaatctattccatttcctgtcactggatttaatcttcgtgatgaagaaaacattgga
caaattaattcagaatcggtcagaagttga

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