Silene latifolia (white campion): 141647799
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Entry
141647799 CDS
T11116
Name
(RefSeq) small ribosomal subunit protein RACK1-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
141647799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141647799
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141647799
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141647799
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141647799
Exosomal proteins of colorectal cancer cells
141647799
Exosomal proteins of bladder cancer cells
141647799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
DSE1_N
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
TRM82_WD
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_HPS5
ASA1
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_DCAF4
Beta-prop_DCAF12
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Beta-prop_ACSF4
eIF2A
PAC11
Beta-prop_WDR19_1st
Tricorn_2nd
Cytochrom_D1
DUF7899
Beta-prop_NUP159_NUP214
TP_0598_N
Beta-prop_IFT140_2nd
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
141647799
NCBI-ProteinID:
XP_074312233
LinkDB
All DBs
Position
3:complement(101009972..101012397)
Genome browser
AA seq
326 aa
AA seq
DB search
MGEQLHLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIQWHLTKEDRTYGVPRRRLT
GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAAGTTARRFVGHTKDVLSVAFSIDNRQI
VSASRDRTIKLWNTLGECKYTIQEADGHNDWVSCVRFSPNNAQPTIVSSSWDKTVKIWNL
TNCKLRSTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDATTIIHSL
CFSPNRYWLCAATESGIKIWDLESKSIVEDLKVDLKTEADNLDGAASTTSKKKIIYCTSL
SWNADGSTLFSGYTDGVIRVWGVGRY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcagcttcacctgaagggcacaatgagggcacacacagacatggtgacagcc
atagcaacaccaatagacaacagcgacatgatagtgacagcatcaagggacaagtcaata
atccaatggcatctgactaaggaagataggacatacggtgtaccacgacgtcgtttaaca
ggacactcacactttgttcaagatgttgtcctttcatcagatggtcagtttgctctttct
ggttcatgggatggtgaactccgtctttgggatcttgctgctggtaccactgctcgtcgt
tttgttggacatactaaagatgttctttctgttgctttctctattgataatcgtcagata
gtctctgcttctcgtgaccgtaccattaagctctggaacactctcggtgagtgcaagtat
accatccaagaggctgatggtcacaatgactgggttagctgtgtgagattcagccctaac
aatgcgcagccaacaattgtatcatcttcttgggacaagactgtcaaaatatggaacctg
actaactgcaaattgaggtccaccttggccggccacaatggttatgtcaacactgttgct
gtttctcctgatggctccttgtgtgccagtggcgggaaagatggtgtaattcttttgtgg
gacttggctgagggcaagaaactttactcgcttgacgcaaccactattatccattctctt
tgcttcagtccaaacaggtactggctctgtgctgccactgaaagcggtattaagatttgg
gacttggagagcaagagcattgttgaggacttgaaggttgatttgaagactgaggctgac
aatttggatggagctgcttcaaccacatcaaagaagaagataatctactgcacaagcttg
agctggaacgctgatggcagcactctgttcagcggatacacagacggtgtcattagggtc
tggggagttggccgctactag
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