Silene latifolia (white campion): 141647837
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Entry
141647837 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141647837
KO
K12874
intron-binding protein aquarius
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141647837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141647837
Spliceosome [BR:
slaf03041
]
Complex B
Other components
Prp19-related factors
141647837
Complex C
141647837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
AAA_22
UvrD-helicase
SLFN-g3_helicase
UvrD_C_2
AAA
AAA_16
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
141647837
NCBI-ProteinID:
XP_074312287
LinkDB
All DBs
Position
3:complement(109421781..109435206)
Genome browser
AA seq
1519 aa
AA seq
DB search
MTKVYGTGTYDFKRHHVAEYPVDLHKPPESSPISTTAPNSITLSDIQRDRLTQIAAATWL
PSSSTSAAAAAAAFNPDLVDQIYRTELTVKSGKKTVPLQRVMILEVSQYLENYLWPHFDP
NTATFEHLMSMILMINEKFRENVAAWVCFHDRKGVFRAFLERVLHLKDQGDRFSIVEKTN
YLVFMINAFQSLEDEVVSETVLRLAGLQCWHSLSFGRFQMELCLNPNLIKKWKKMTKAEA
KKAKKRGESYDPLNSVEATFLKNLFEEFLEVLNSKVFHRAQHDSENLDGNFEKVDDACIL
YCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYTHQRGKLFSQLVDLLQFYE
TFEINDHEGTQLTDDEVLQAHYDRFQSFQLLGFKKMPKLRELALANIGAVDKRVDLSKKL
SVLSPEELKDLICSKLKLISKDDPWSDRVDFLIEVMVSFFEKQKSQKEAINALPLYPNEQ
IMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPH
LLPYINSEGETAFRGWSRMAVPIREFKITEIKQPNIGEVKPAAATANITFSIASYRSHIR
SEWDALKEHDVLFLLSIRPSFEPLSEEESDKATVPQRLGLQYVRGCEVIEVQDEEGNPMN
DFTGKNKRDEWKPPKGELRTITVALDTAQYHMDVTDIAEKGVEDVYGTFNILMRRKPKEN
NFKAILESIRDLMNETCIVPDWLHNIFLGYGNPSAAQWTNMPDLLETVDFKDTFLDADHL
KESFSEYQISFVKPDGSENKCPEPPFRIRLPKTLKSNPQALPGNKCNVTLSGDENGSAVL
ETLIVETYVPPNPGPYPQDKPKQNSVRFTSTQIGAIISGVQPGLTMVVGPPGTGKTDTAV
QILNVLYHNCPTQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATDLDFSR
QGRVNAMLVRRLELLGEVERLARSLKLPDDVGYTCETAGYFWLLHVYSRWEQFLADCSDN
KDKSMYVRDRFPFTEFFSNAPQPIFTGDSFDKDMRAAKGCFRHLKTMFQELEECRAFELL
KSTVNRANYLMTKQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQILEIETFIPML
LQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQG
RARPSIAKLYNWRYRELGDLLSVKQGTIFQRANAGFSYDYQLVDVPDYQGKGESAPSPWF
YQNEGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVISRRCVPYDFIGPPNKV
ATVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYELQ
PTFQRLLQRPDRLSLNLSEYVTNTDRLVEETGPVYLVSGVEEMGNIVNSKMHEVYQARMV
HHRYNPSYIGQEDTSIHEAPHFGQQNSVSDMDTDISTTGNGEAHDVRPENIPEKVNDVGN
DNLQPENNVKKSDSEVMEE
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagtatatggcacaggcacctacgatttcaagcgccaccatgtcgccgagtac
cctgtcgaccttcacaaaccacccgagtcctccccaatctccaccaccgcacctaactcc
atcactctctccgacattcagcgcgaccgtctcactcaaatcgctgctgctacctggctc
ccttcctcctccacctccgccgccgctgccgctgccgctttcaaccctgacctcgtcgac
caaatttaccgcaccgagctcaccgttaagtctggtaagaagactgtcccgttacagcgt
gttatgattttggaggttagccagtatcttgagaattatctttggcctcatttcgaccct
aatactgccactttcgagcatcttatgagtatgattcttatgattaatgagaagtttaga
gaaaatgtcgccgcctgggtgtgctttcatgataggaaaggtgtatttagggcattctta
gagcgtgttcttcaccttaaggatcagggagaccgtttcagtattgtggagaagacaaac
tatttggttttcatgatcaatgcctttcagagcttagaggatgaagtcgttagtgagact
gttctaaggctggcgggtctgcaatgctggcatagcttgtcatttggtcgctttcagatg
gaactgtgtcttaatccaaatctgataaagaaatggaaaaagatgacgaaagcagaagcc
aaaaaggctaagaaacgaggagaaagctatgatcccttaaattctgtggaagcgacgttt
ctaaagaatctgtttgaagagttcctagaggtgctcaattctaaggtgttccacagagca
caacatgattcagaaaatcttgatggcaactttgaaaaagttgatgatgcttgcatctta
tactgtgagaggtttatggagtttcttatagatctattgagccaactgccgacaagaaga
tacttgaggccccttgtggctgatgttgctgtggttgctaaatgtcacttaagtgcactt
tacactcatcagaggggaaagttgttttcacaacttgttgacttgttacagttctatgaa
acttttgagattaatgatcatgaagggacacagttaactgacgacgaggttcttcaagct
cattatgaccgctttcagtcctttcagttgcttggattcaagaaaatgcccaagttgcgg
gagctggcattagcaaatattggtgcagtagacaagcgtgttgatctctcgaaaaagctg
tctgttctttcacctgaagaactaaaagatttaatttgttccaagctcaaactcatatca
aaggatgatccatggtctgatagagttgattttctcattgaagtcatggtatcctttttt
gagaaacagaagtctcagaaggaagccataaatgctcttccactctatccaaatgagcaa
ataatgtgggatgaaagccttgtacctagcattaactactcaggagaaggctgcctagct
ctgccaaaacttaacttacagtttttgacccttcatgattatctcttgagaaacttcaat
ctttttcgtcttgagtcaacatatgaaattcgggaggatattcaggaagctgttcctcac
cttcttccctacatcaacagtgagggagaaacagctttccgcggatggtcgagaatggct
gtgcccataagagaatttaaaataactgagattaagcagcctaacattggggaggtaaag
ccagcagcagctactgcaaatattacatttagcattgccagctatcgatcacatatacga
tcagaatgggatgcacttaaagagcatgacgttttgtttttgctttctatacgcccttct
ttcgagccattgagcgaagaggaatctgataaagcaactgttccacaaaggcttggactt
caatatgtacgtggatgtgaagtaatagaggttcaagatgaggaaggaaatccgatgaat
gatttcactgggaaaaacaaacgggacgaatggaagcctcccaagggtgaactgagaact
attactgttgcactagatacagcacaatatcacatggatgtgactgatatcgcagagaaa
ggggttgaagatgtgtatgggacttttaatattttgatgcgtagaaaacccaaggaaaac
aacttcaaggctattttagaatccatccgagatcttatgaatgaaacttgcatagtccct
gactggctacacaacattttcttgggttatggaaatccttcggctgctcagtggactaac
atgcctgaccttttggagacggtagattttaaggatactttccttgatgcagatcacttg
aaagaaagtttttctgagtatcagatttcctttgtcaagcctgatggttcagagaacaag
tgtccagagcctccatttcggatcaggcttcccaagacgctaaaaagcaatcctcaagct
cttcctggcaataaatgcaatgtaactctgtctggtgatgaaaatggttccgcagttctg
gaaacacttattgttgagacatatgtgcctccaaatccaggcccttatccccaggataaa
cccaaacagaactctgtcagatttacctcaacacagattggagcgatcatctctggcgtt
cagcctgggttgacaatggtggtaggtccgccaggtactggtaaaacagatacagctgtt
cagattttgaacgttctctatcacaactgtcctactcaaaggacattgattattactcat
tcaaatcaagctttgaatgatctttttgaaaagataatggagagagatgtgcctgctcgg
tatcttcttcgattaggacaaggcgagcaggaattagcgactgatcttgactttagtcgt
cagggtcgtgttaatgcaatgctggtgcggcgattggaactgcttggtgaggtagagagg
ctagcaagatctctaaagcttcctgatgatgtaggttatacttgtgaaactgctggatac
ttttggctactgcatgtttactcacgttgggagcagtttcttgctgattgttctgataat
aaagataagtcaatgtatgttcgagatcgtttcccttttaccgagttcttttctaacgcc
cctcaaccaatttttactggtgattcttttgataaagacatgcgtgctgcaaaagggtgc
tttcgtcatctgaaaactatgtttcaggagctcgaagaatgcagggcattcgagttactc
aaatcaacggtcaatagggcaaattaccttatgactaaacaggcgaaaatagttgctatg
acttgtacacatgccgctcttaagcggaaggacttcctgcagttaggattcaagtatgac
aatctactaatggaagaaagtgcacaaatattggaaattgagacttttatcccaatgctt
cttcaacggcaagaagatggatatgcacgtcttaaacgttgcatattaattggtgatcat
catcaattgcctcctgttgttaagaacatggctttccagaagtatagccacatggaccag
agtttgtttaccaggtttgttcgtctgggtattccatatatcgagttaaatgcccagggt
agagcacggccaagtatagccaaactttataactggcgatatagagagttgggagatctt
ctttctgtaaagcaaggcactatcttccagagggcaaatgctggcttttcttatgactac
cagttagtggatgtgccggactatcaggggaaaggtgaatccgcaccatcaccatggttt
taccaaaatgagggagaggctgaatacattgttagcgtttatatttacatgcgtttattg
ggctatcctgctaataagatatccatattaacaacctataatggtcagaagctcctcatt
cgtgatgttatcagcagaagatgtgttccgtacgactttattgggcctccaaacaaggtt
gcaacagtggacaaatttcaaggtcagcagaatgacttcattctattatcgcttgtgcga
actcgttttgtcggtcatttgcgtgatgttagaagattggttgtggcaatgtctcgtgca
agactggggctttatgttttctgccgtcgttcattatttgagcagtgttatgaactacag
cccacgtttcaacgtcttcttcagaggccagatcgactttcattgaacttgtctgaatat
gtgactaacaccgaccgtcttgtcgaggaaactggtccagtttatcttgtcagtggtgtg
gaagagatgggcaatatcgtcaactccaaaatgcatgaggtctaccaggcaaggatggtt
catcatcggtataacccttcctatattgggcaagaagacacgtcaattcatgaagcgccc
catttcggtcaacagaactcggtaagcgacatggacacagatatatctacaacaggaaat
ggtgaggcacatgatgtccggcccgaaaatatacccgagaaagttaatgatgttggaaac
gacaacttgcaaccagaaaacaatgtgaagaaatcagattctgaagtcatggaggagtga
DBGET
integrated database retrieval system
