Silene latifolia (white campion): 141648000
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Entry
141648000 CDS
T11116
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141648000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141648000
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141648000
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141648000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141648000
Enzymes [BR:
slaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
141648000
Messenger RNA biogenesis [BR:
slaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
141648000
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP60 / Chaperonin
141648000
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
141648000
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141648000
Exosomal proteins of other body fluids (saliva and urine)
141648000
Exosomal proteins of breast cancer cells
141648000
Exosomal proteins of colorectal cancer cells
141648000
Exosomal proteins of bladder cancer cells
141648000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
141648000
NCBI-ProteinID:
XP_074312510
LinkDB
All DBs
Position
3:128037146..128045925
Genome browser
AA seq
606 aa
AA seq
DB search
MASSYVAMSAIGSLISGSHSIDKKLLGPSHKLSSLGCISTSSLRTSTGNVVLGRRCSFQV
KAATKRLHFNKNGAAIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKIVLAGANPIQVA
KGIENTVKCLVSELKLMSKEVEDKELADVAAVSAGNNYAIGNMIADAMGKVGRKGVVTLE
EGTGATDSLYVVEGMQFDRGYISPYFVTDSEKMIAEYENCKLLLVDQKIKNARDLVNVLE
DAIKSNHAILIIAEDIEQEPLATLVVNKLRGSLKIAAMKQPGFGDRKHQYIDDIAVLTGG
TVIRDEVGLSLDKVGSEVLGHASKIVLAKETATIVGDGSTQEAVLKRIAQIKKQLEDADT
DYEKNKLNERIAKLTSGVAVIQVGARTETELKERKLRVEDALNATKAAVEEGIVVGGGCT
LLRLSSKVDAIKETLENEEQKLGADIVKRALTYPLDLIAKNAGVNGAVVTEKVLSNDNPS
FGYNAATGKYEDLMAAGIIDPTKVVRCCLENSASVAKTFLTSDAVVTEIPEPEPMPAANP
MDNSGY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagttatgtcgccatgtctgcaattggatctttgatttcgggaagccactcg
attgataagaaacttctaggcccgtcacacaaattgtcttcgttgggctgcatatctact
agttctcttagaactagtacaggtaatgttgtccttgggagaaggtgttccttccaagtt
aaggctgccacaaagcgattgcatttcaacaagaacggtgctgctattagaaaactacag
gcaggcgtgaataagcttgcggatttggtgggtgttacacttggccctaaaggaagaaat
gtggttttagagagcaagtatggttctcccaaaattgttaatgatggtgtgactgtggct
aaggaggttgaactggaagatcctgttgaaaacattggagctaggcttgtcaggcaagct
gcttccaaaaccaatgatttagcaggagatggtaccactacatctgtagtcttagcacaa
ggattgatcgctgaaggcgtaaagattgtattagctggtgcaaatcctatccaggtggcc
aaagggatagaaaacactgttaagtgtttagtgtccgagttgaaactgatgtctaaagag
gtggaagacaaagagcttgcagatgtagctgctgttagtgcaggaaacaactatgcgata
ggaaatatgattgctgacgccatgggcaaagtgggacgcaagggtgtggtaactcttgaa
gaggggacaggtgctacagacagcttgtatgttgtagaaggcatgcagtttgatcgtggc
tacatctccccgtactttgttaccgacagcgagaaaatgattgctgaatacgaaaactgt
aagttgcttctggttgatcagaagatcaaaaatgcaagggaccttgttaatgtcctggaa
gatgcaatcaagagcaatcatgcaattttgataatagcagaagatattgagcaagaacct
ctcgctaccctggttgtaaacaagctcagaggatcacttaagattgctgctatgaaacaa
ccaggatttggagaccgaaagcaccaatatattgatgatattgctgtccttactggaggg
accgtgatcagagatgaggtcggtttgtcgttggataaagtcggctcagaggttttggga
catgcatctaaaattgtgctcgccaaggagacagctactattgttggcgatggcagcaca
caagaagcagttcttaagagaattgcccaaattaaaaagcaacttgaggatgctgacaca
gattatgaaaaaaataaactaaatgaacgaattgcaaaattgaccagtggagttgctgtt
atccaggtcggagcacgaactgagaccgagctaaaagagaggaagctgagagtggaagat
gctcttaatgcaaccaaggcagcagtagaagaaggtattgtcgtgggtggaggctgcacc
ttgttgcgcctttcatctaaagtggatgccatcaaggagactcttgaaaacgaagagcaa
aagctcggagcagatattgtgaaaagagcgcttacatatccgttggatctgattgcgaag
aatgcaggagttaatggagctgttgttactgagaaggttctatctaatgataatccgagt
tttgggtacaacgctgcaactggaaaatacgaggatctcatggctgcgggcatcattgat
cccaccaaggtggtgagatgttgcttggagaattccgcttccgtagcaaagacattcctt
acatcagacgcagtggtgactgagatcccggagcctgagcctatgcctgctgcaaaccca
atggacaactcaggttattga
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