Silene latifolia (white campion): 141648008
Help
Entry
141648008 CDS
T11116
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141648008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141648008
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141648008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
141648008
NCBI-ProteinID:
XP_074312518
LinkDB
All DBs
Position
3:complement(128490376..128492895)
Genome browser
AA seq
574 aa
AA seq
DB search
MSLISQNVVKTKVKRKSKSKSKDDEGEETTLVNHVEEIVEDGDLNVDEGGIRKKKKKRSQ
EEVEAMKIEEQLEMEQLGSLLFGSLHSPVEFGKGGHDEVEINGGDDSALFVMDRSGNKDL
SVYEDDGDARYVVGVNDEDGVKERRPVWVDDEEEEATVDISNVNRLRKLRKEEDERVISG
SSYVARVRAQHAKLNPATKWAQLDSSKKGYDSDADSEVENGELVANGDRRSGDFDDILQT
NEDVVVKRGAKLLPGILEYSRLVDANAEDPSNARINSVQFHRNHQLLLTAGHDKKLRFFQ
IDGKRNKMMDTIFFEDCPIFNASFLPDGSQVIVSGRRKFFYSVDISKGSVDKIGPLTGRE
EKSLEFFEVSPDSRTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFSADGQKLLSS
GGDGQIYHWDLRTRTCFHKGVDEGSLVGTALCTSPMGNLFASGSDSGIVNVYNRDEFLGG
NRKPIKKIDNLTTKVHEMKFNHDAQILAICSRNGKSSLKLVHVPSFTVFSNWPPPNRSLS
VPRCLDFSPAGGFMAIGNAAGKVQLYKLNHYQRA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatttcacaaaatgttgttaagactaaagttaagagaaagtctaagagtaag
agtaaggatgatgagggagaagagacgacattggttaatcacgttgaggagattgttgaa
gacggggatttgaatgtcgatgaggggggaatccgtaagaagaaaaagaaaaggagtcag
gaggaagtcgaggcgatgaaaatagaagaacaattggaaatggaacaattaggaagcttg
ttgtttggttctttgcattcgcccgttgaatttggaaaggggggccatgatgaggttgaa
attaatggcggtgatgattctgcgttgtttgttatggacaggtctggtaataaggatttg
tcggtttatgaggatgatggtgatgctagatacgtagttggggttaatgatgaggatggt
gttaaggaaaggaggcctgtttgggtggatgatgaggaagaggaggctactgttgatatt
tcgaatgttaataggttaaggaagttgaggaaggaagaagatgagcgtgttatttcgggt
tcttcttatgtagcaagggtgagggctcagcatgccaagctgaaccctgcaacaaaatgg
gcccagcttgattcgagtaagaaagggtatgactctgatgcagattctgaagtggaaaat
ggggagttggtagctaatggggatcgaaggtcgggagattttgacgacattcttcaaaca
aatgaagatgttgtggtgaagagaggagcgaagcttttgcctggaatccttgagtactcg
agattagttgatgctaatgcagaagacccgtcaaatgcccgaataaactctgtccagttc
catagaaatcatcagttgcttcttactgctggacatgataaaaagttgagatttttccaa
atcgatggtaaaaggaataaaatgatggataccatctttttcgaagattgtcctattttc
aacgcttcatttttgcccgatggttctcaagtcattgtatccggaagaagaaagttcttc
tatagtgtcgacatatcaaaaggaagtgttgataaaattggacctttgacaggaagagaa
gaaaagagcttggagtttttcgaggtttctccagattctcgtaccattgcttttgtaggt
aatgaaggctatatcttgctagtctcttccaaaacaaaggaactaattggcactcttaaa
atgaacggaaccgtgcgatcactagccttttctgctgacgggcaaaagttgctaagttcc
gggggtgacgggcagatctatcattgggacttaagaacaagaacttgcttccataagggt
gtagatgaaggatcccttgttggtactgctttatgtacttcaccaatggggaatctattt
gcatcgggctctgatagtggaattgttaatgtttataacagggatgaattcttggggggc
aatagaaaaccgatcaagaaaattgataatttaactactaaagtacatgaaatgaaattc
aaccatgatgcccagatattagctatttgttcaagaaatggcaaaagcagcctgaagttg
gttcatgtcccgtcatttaccgtcttttccaattggccccctccaaacagatcgttatct
gttccaagatgtcttgattttagccctgccggtggtttcatggctatcggaaatgctgct
gggaaagtacagctctacaagctaaaccattatcagcgagcataa
DBGET
integrated database retrieval system
