Silene latifolia (white campion): 141648071
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Entry
141648071 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141648071
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141648071
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141648071
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141648071
03036 Chromosome and associated proteins [BR:
slaf03036
]
141648071
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141648071
Peptidases and inhibitors [BR:
slaf01002
]
Metallo peptidases
Family M67
141648071
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141648071
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
141648071
BRISC complex
141648071
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
141648071
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
141648071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
141648071
NCBI-ProteinID:
XP_074312626
LinkDB
All DBs
Position
3:132621051..132629001
Genome browser
AA seq
406 aa
AA seq
DB search
MSLTNVKMSEEVWLTCVTHALSTETEEIMGLLLGDIECSKSGKSTALIWGASPQTRSDRR
KDRVETNPEQLAAASAMAERMSTTTGRRTRVIGWYHSHPHITVLPSHVDVRTQGMYQLLD
SGFIGLIFSCFNEDAFKVGRIQVIAFQSLDGSQSYMSRPLSPPSAKRSTVIELESSLSSD
DVSTRLGSGKAEILELDTGDSRNNVFKGTSRIGGKSADAFVDVDPMDMSDGMQEAMHRSH
LDMSGAEYVRKEIPLQVLPASLLLKLDSPLASFTDLQQVIYEEEKAAYNQAISNNLRDGK
VHPLAFIHHTSTYQASMCKLMECCLTPAIDALEDHIRQNDLRLGMLAEEAKVLEAEISRG
TEGTVGSPHRVDGVRGSPSRAHSFSDSMNPRSPASPSHSNRSRKGF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgacaaatgtgaaaatgtcggaagaagtttggttaacttgtgttacacacgca
ttgtctactgaaactgaagagattatgggtcttcttcttggtgatattgagtgctcgaag
tctggtaaatccactgcattgatatggggtgcatcaccacagactcgatcagataggagg
aaagatcgagtggagactaatcctgaacaattggctgcagcatcagctatggcagaaagg
atgagcactacaactggaagaagaactagagtgattggatggtaccattctcatccgcat
ataactgttttgccatcccatgttgatgttcgtactcaggggatgtatcagcttcttgat
tctggattcattggacttatattttcatgttttaatgaagatgcattcaaggttggaaga
attcaagtaattgctttccaatccttggatgggagtcagagctacatgtcaagacctttg
tctccaccttctgctaaaagaagtactgttatagagcttgaatcatctttgagttctgat
gatgtatctacaaggttaggctccgggaaggctgaaatacttgaattggatacgggtgat
tcccgtaataatgtgttcaaggggactagtaggattggtgggaagtctgccgatgctttt
gttgacgtagatccgatggatatgtctgatggtatgcaagaagcaatgcaccgctctcat
ttggacatgagtggtgcagaatacgtccggaaggaaatccctcttcaagttcttccagca
tcattgcttctcaagcttgattcacctttggcctcattcacagacttgcaacaagtgatc
tatgaagaggaaaaggctgcatataaccaagcaatctccaataaccttagggatgggaag
gtacatcctctcgctttcattcatcatacgtcaacatatcaggcttcaatgtgcaaattg
atggagtgctgtcttactcctgccatagatgctctggaggatcatatccgacaaaatgac
cttcggttaggaatgttagccgaagaagccaaggttttggaggcggagatttctagagga
actgaaggaacagtcggttctcctcaccgggttgatggagttcgaggtagtccatctcgt
gctcatagtttcagtgattccatgaatcctcgaagtcctgctagtccaagtcacagtaac
cgaagtagaaaaggattttga
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