Silene latifolia (white campion): 141648287
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Entry
141648287 CDS
T11116
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
slaf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141648287
03083 Polycomb repressive complex
141648287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141648287
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
141648287
Histone modification proteins
HAT complexes
HATB complex
141648287
HDAC complexes
Sin3A-HDAC complex
141648287
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
141648287
PRC2.2
141648287
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
141648287
Heterochromatin formation proteins
Other heterochromatin formation proteins
141648287
Chromatin remodeling factors
NuRD complex
141648287
NuRF complex
141648287
NuRF complex (fruit fly)
141648287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
WD40_RFWD3
Beta-prop_NUP159_NUP214
ANAPC4_WD40
MIOS_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
141648287
NCBI-ProteinID:
XP_074312935
LinkDB
All DBs
Position
3:145370700..145376756
Genome browser
AA seq
392 aa
AA seq
DB search
MGEEGEDAPMTEQQLIEEFAVWKKNTPVLYDVVLYHPLEWPSLTVQWLPSPPKLDPDTSM
AVHQLILGTHTCDDVPNYLMLADVHLSPDNGPCSSAPKVEIVKKFHVDGEVNRARCMPQK
PNIVAAKTSEPEVYVFDMSKDMDTNGTESTGPSWKLRGHEKEGYGISWNPFKEGHLLSGS
YDCNICLWDVSSMPQSSVIDAMSVYKAHKNIVEHVAWHTKNENLFGSVDDDGQLMIWDTR
SDKPQHSVVAHEKEVNYLAFNTFNEWILATASSDTTIGLFDLRKLTAPLHFLSSHTEEVF
QVEWDPNHETVLASSSDDRRLMVWDLNRIGDEQLEGEAEDGPPELLFSHGGHKAKISDFS
WNKNVPWAISSVADDNTVQVWQMAESIYRDED
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaaggagaagatgcaccaatgacggagcaacaattgatcgaagaattcgcg
gtatggaagaagaacacaccggtattatacgatgtcgttttgtaccatcctcttgaatgg
ccatctttgacagttcaatggcttccttcgccgcccaagctcgatccagatacatcaatg
gcggttcatcagcttatccttgggacccacacttgtgatgatgttcctaattatcttatg
cttgctgatgttcatctgtcgccggataatggtccttgttcttcggctcccaaggtggag
attgtgaagaagtttcatgttgatggggaggtgaaccgtgctcgatgtatgccacagaaa
cctaatattgttgctgcaaagacgagtgagcctgaggtgtatgttttcgatatgtccaag
gatatggacacgaatgggacggaatcgactggtcctagctggaaactgagaggtcatgag
aaggaaggctatggaatttcatggaatccctttaaggagggtcatttgctgagtggttct
tatgattgtaacatatgtttgtgggatgtgtcatcgatgcctcagagttcagtcattgat
gctatgagtgtctataaggctcacaagaacatagtagaacatgtcgcatggcatacaaag
aatgagaacttatttggttcagttgatgatgatggtcaactgatgatctgggatacacga
tctgacaagcctcaacattctgtcgttgctcatgaaaaggaggtgaattatctggctttc
aataccttcaatgaatggatattagcgacagcttcttcagatactaccatcggactgttc
gacttaagaaagctgactgcacccttgcatttcttgtccagtcacacagaagaggtgttt
caggttgaatgggatccgaatcacgagactgtgctggcatcttcctcagatgatagaagg
ctgatggtgtgggaccttaacaggattggggatgagcagctggagggagaagctgaagat
ggaccaccggaactgctcttctcgcatggaggtcacaaggctaagatatcagacttctct
tggaacaaaaacgtaccatgggcgatttcaagcgtggctgatgacaatacagtccaggtc
tggcaaatggctgagagtatataccgagatgaagactaa
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integrated database retrieval system
