Silene latifolia (white campion): 141648472
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Entry
141648472 CDS
T11116
Name
(RefSeq) squalene synthase 2-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00100
Steroid biosynthesis
slaf00909
Sesquiterpenoid and triterpenoid biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
141648472
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
141648472
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slaf01006
]
141648472
Enzymes [BR:
slaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
141648472
Prenyltransferases [BR:
slaf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
141648472
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
OppC_N
Motif
Other DBs
NCBI-GeneID:
141648472
NCBI-ProteinID:
XP_074313259
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Position
3:150186064..150192106
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AA seq
414 aa
AA seq
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MANLGAILKHPDEIYPLLKLKMAVKEAEKQIPEEHHWGFCYSMLHKVSRSFGLVIQQLGT
ELRNAVCVFYLVLRALDTVEDDTSVATEVKVPILKAFHQHIYDRDWHFSCGTKHYKVLMD
EFHHVSTAFLELDRGYQEAIEDITKRMGAGMAKFICKEVETVDDYNEYCHYVAGLVGLGL
SKLFHNSGLEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWKKYVLKL
EDLKYEENSEEAVQCLNVMVTNALLHAEDCLTYMSALRDQAIFRFCAIPQIMAIGTLALC
YDNIQVFRGVVKMRRGLTAIVIDQTNTMADVYGAFFDFACMLKSKVDKTDPNSTKTLNRI
EAIQKVCKDSGTLSKRKLYVVKNKSGLSSAVMFVIIIILAIILSRLSSNRQNNY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttaggcgcaattttgaaacacccagatgaaatttacccacttttgaagtta
aaaatggcggttaaagaagcagagaaacaaattcctgaagaacaccactggggtttttgt
tactctatgcttcataaagtttcgaggagttttggtcttgttattcaacaacttggtact
gaattacgcaatgctgtatgcgtcttttatttggtacttagagccctcgacactgtagag
gatgatacgagcgtagccacagaagtcaaagttcctattctgaaagccttccatcagcac
atatatgatcgcgactggcatttctcttgtggaacaaagcattataaagttctcatggac
gagtttcaccatgtctcaacagctttcttggagcttgacagaggttatcaggaggcaatt
gaggatatcaccaaaaggatgggtgctggaatggcaaaatttatctgcaaagaggtagaa
acagttgacgactacaatgaatattgccattatgtcgcaggacttgttggcctaggacta
tcaaagctgttccataactctggcttggaggatctggcatcagatagtctatcgaattca
atgggtttatttctacagaaaacaaacatcattcgtgattaccttgaagatataaatgag
ataccaaaatctcgcatgttttggcctcgggagatatggaaaaaatatgtcttgaaactt
gaggatctgaagtacgaggagaactctgaagaagcagttcagtgcttaaatgttatggtg
accaacgctttgttgcatgcggaagattgcctcacatacatgtctgctttgcgggaccaa
gctatattccggttttgtgctattccacaaatcatggccattggaacattggctttgtgt
tacgacaacattcaagtcttcagaggcgtcgtgaaaatgagacgtggtctcacagctata
gtaattgaccaaacaaatacaatggctgatgtttatggcgccttcttcgattttgcctgc
atgttaaaatctaaggttgataagacggatccaaattccacaaaaacactgaacagaatt
gaagcgatccagaaagtttgcaaggactcgggaaccctaagcaaaaggaaattatatgtc
gtgaaaaacaagtcgggattaagttcagctgtgatgtttgtgattatcattatactggca
atcattctgtcccgtctgtcttccaaccggcaaaataactactaa
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