Silene latifolia (white campion): 141648479
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Entry
141648479 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141648479 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141648479
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
141648479
TFIIIC, fungi type
141648479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_8
TPR_1
TPR_14
TPR_7
TPR_16
TPR_12
TPR_2
TPR_20
TPR_CcmH_CycH
TPR_9
TPR_Slam
DUF7017
ANAPC3
Coatomer_E
DUF2225
Wzy_C_2
ARM_TT21_5th
TPR_17
SNAP
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
141648479
NCBI-ProteinID:
XP_074313269
LinkDB
All DBs
Position
3:complement(150427785..150438853)
Genome browser
AA seq
947 aa
AA seq
DB search
MKSVDEMDNDKLFEEGLHPPVPSLVANNEGDEEEGEDEEEEEGEDEKGKMEDENEEDGDS
SEENEEEEGEDEMEEGEDTSVVLFDGGMDLLDFVEGNVGDVQLYQHFKRIDYEAKKQKKR
KSIEFDDQGHGLVKKPRQIIGATQEEVAEFLNLGSRRRQQKVKKRGRPKGLQNNLSPEIT
KMLGDAVIHYALGRYEAAISVSKEVVLLASNLPDGYHTLSHVYNLKGDMKKATDFLLCAA
YLSPKDSPIWKRLIPLSIEQGNIGLTKFCLKKAIKADPSDVTLRYHKASLFMEAGDYLKA
ADMYVKIVQVSHDDFEALKKATMLYNQCGQYEKSIAMLEDYVKDDPDADNAVIDLLASSY
MAQNDYSRALQHIESAVRVCGTGEIGTGEIPLHLTIKRGICHLHLADVDKAETCFRVLER
GFAEQQTDLVILVANTFVELQQFQSALKYYLMLEGSPSYNGVVCLKIANCYSALKEAASA
IQFFYKALGAHEDDVGIRLTLASLLFEENREDEAISLLSPPINSAGSSEDGDTDNSEQWW
CNVKVKLKLSQFYKRRGMLEAFVEVIYPLVHDSLKYDSVHQNVKRRKSLSRLELLKRVKV
LGDPQTDSVFGHFRRPVPKNDVLKANRAKKKLLEMRALANEDETLAAMDDDDEQQPLKAP
PWPDFFKDEESYNLISDLCKGLISLRRYSEALELITLGLKITYKKMPTEKKEKFRSLGAE
IAMNITDPSDGIDYVRYLVQQRPQSKAAWNCYYKLVLRLENRLSKHNKFLYHMRAVHKDL
IPPMIISGNQFTQISQHQVAAREYLEAYKQMPDSPLINLCAGTALINLALGYRLQNKHQC
VAQGLAFLYNNLRISENSQEALYNVARACHHVGLVSLAASYYEKVLAIRQEDLPMPEIMK
MDKDAARALKPGYCDLRREAAFNLHLIYKNSGAIDLARQILRNYCTF
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgtagacgagatggacaacgacaaactctttgaggagggtttgcatcctcct
gttccttctcttgttgctaacaacgagggagatgaggaggaaggcgaggatgaggaggag
gaggaaggagaggatgagaaggggaagatggaggacgagaacgaggaagatggagatagc
agcgaggaaaatgaagaggaggaaggagaggatgaaatggaggaaggggaagacacatct
gttgtgctatttgatggagggatggaccttttggattttgttgagggcaatgttggtgat
gtccaactatatcaacatttcaaacggatcgattatgaagccaagaaacagaagaaacgg
aaatccattgagtttgatgatcaaggacatgggttagttaagaagccgcgacagattatt
ggagcaacacaagaggaagtagcagaatttttaaatcttggttcccggagaagacaacag
aaggttaagaagagagggaggcctaaaggtttacaaaataatcttagccctgaaattaca
aagatgcttggcgatgccgttattcactatgctcttggccgttatgaagctgcaattagc
gtgtcgaaggaggttgttctgctagcgtcaaatctgcctgatggatatcacacacttagt
catgtatataacttaaagggcgatatgaagaaagcgacagatttcttgttgtgtgctgca
tatcttagtccaaaagattcacctatttggaaacgtcttattcctttatccatagagcag
gggaatattggcctaactaagttttgccttaaaaaagcaataaaagcggatccatctgat
gttacccttagataccacaaagcttcactttttatggaggcaggagattacttaaaagct
gctgatatgtatgttaagatagttcaagtgagtcatgatgattttgaagctctcaagaag
gcgacaatgttgtataaccaatgtggccaatatgagaaatctatagctatgttggaggac
tatgttaaagatgatcctgatgctgacaatgcggtgatcgatttattggcttcctcatac
atggcacaaaatgactacagtagagctcttcagcacattgaaagtgctgtgagggtttgc
ggaactggagaaatcggaactggtgaaattccactgcatcttacaattaaaagagggatt
tgccatttgcatcttgcagatgtggacaaggcagagacttgtttccgggttctggaaagg
ggatttgctgagcagcagactgacctcgtgatattagtggcaaacacattcgtagagcta
cagcaatttcaatctgcattgaagtactatctgatgctcgaagggagtccctcatataat
ggagttgtatgtttaaaaattgccaactgttactcggctttaaaagaagcagcttcagct
attcagttcttctacaaagctttaggagcacatgaagatgatgttggtattcgcttaact
ttggcatcacttctttttgaggaaaatagagaagatgaagcaataagtctgctttctcct
ccaattaattcagcaggatcatcagaagacggggatacagataattctgaacaatggtgg
tgtaatgtgaaagtaaaactgaagctgtctcaattttataaacgtcgagggatgcttgag
gcctttgttgaagtgatctatcctcttgtccatgactcactgaaatatgattccgtgcat
cagaatgtaaaacggagaaaatcgctatctaggcttgagctcttgaagagagtcaaagtt
ttaggcgaccctcaaacagattcggtctttggacatttcagaagaccagttccgaagaac
gatgttttaaaggccaaccgagcgaagaaaaagttgcttgagatgagagcattagcaaat
gaagacgagactttagctgcaatggacgacgatgatgagcaacaaccattgaaggcacct
ccatggcctgatttcttcaaggatgaggagagttataatctcatttcagatttatgtaaa
ggactgatctcactgagaagatatagtgaggcactggaattgataacactcggtttgaaa
ataacttacaagaagatgcctaccgagaagaaggaaaaattccgctcccttggtgctgaa
atagcaatgaacattactgatccttctgatgggatcgattacgtacgttacctagttcag
cagcgcccacaaagtaaagcagcctggaactgctattataagttagtcttaagattagag
aaccgactttccaagcataacaaattcctttatcatatgcgagcggtgcacaaggattta
ataccacccatgatcatctccgggaatcaatttacgcagattagccaacaccaagtagct
gcaagagaatatctagaagcttacaaacaaatgccggactcccctttaatcaatctttgt
gcagggactgccttgatcaatttagccctcggatatagactgcaaaacaagcatcaatgt
gttgcacaaggcttagcgtttctctacaacaatttacgaatttctgaaaatagtcaggaa
gcgctatataatgtagctagagcgtgtcaccatgtgggtctcgtttcattagctgcatcg
tactatgagaaggtacttgccattcggcaagaagacctgcccatgccggagattatgaag
atggataaagatgcggcaagggctctgaagcccgggtattgtgacctgagaagagaagcg
gcatttaacttgcacttgatttacaagaatagcggagcgattgatcttgctaggcagatc
ctaaggaattactgcaccttttga
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