Silene latifolia (white campion): 141649918
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Entry
141649918 CDS
T11116
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.4-like
KO
K14487
auxin responsive GH3 gene family
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141649918
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
141649918
NCBI-ProteinID:
XP_074314686
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Position
3:147540210..147542463
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AA seq
596 aa
AA seq
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MDAAAVMAVDEESGGKVQARAYEASVKFIEELTRKCHEVQTMVLAEILSQNAETEYLKRH
EMSHGHVDQETFKTNVPVVTYEDIKSDILRLYNGDFSPILCAQPIVELLFSSGTSSAQRK
MIPITDDDLQRRHKLLTSVSPFIKKSPDKGKMLGLLLTRDETITPGGLIARPGLNTLFKN
PQFYNDNPYPYNTNTSPIEAIHCPDHFQSIYTQLLCGFYQRHDVTRVKVIFGSNLIWAIR
FLKANYSNLCHDISSGNLNPKITNLSLRTRMTETFMQHPQPKLAKFIESACLGKNWEGIL
QKIWPNAKYIEAILTGSMTQYIPILNYYSGGLSLVTLNYASSECDFGYNLDPMCGPYDIS
YTIMPNMAYYEFIPLSPEDDVSGSQPKPVDMANVVVGQEYELVITTYTGLYRYRMGDVIR
LTGFYNSTPQFKFIRRRDVVLSIDVEKTTESDLHKAIQTASIVLQQFNTTILDYTSNSCT
KTNPGHYVIYIELITKTLANGIGLGVNILEECCLAMEESLGFYYRSCRKSYCIGPLEIRV
LSNGTFEKMMDFAISNGATFNQFKMPRCVKSLSMLELLDSRVISSHFSPSMPHTLP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggccgctgtgatggcagtcgacgaggagagtggaggaaaggttcaagctcgt
gcttacgaagcatcggtcaaatttatagaggaattgactagaaagtgtcatgaggttcaa
accatggttttggcagagatactaagccaaaacgcagagacggagtacttgaaacgacat
gaaatgtcgcatggacatgtcgaccaagagacgttcaagaccaatgtgccggtagtcacg
tatgaggatataaagtcggatatcctacgcttatataatggtgatttttcgcccatatta
tgtgctcaacccatcgttgagttattatttagctcaggaacatcaagtgcgcaaagaaag
atgataccaataactgatgatgatttgcaaaggcgacataagttgctcacttccgtttcc
ccttttatcaaaaagtcacccgataaaggaaagatgttaggcttgttactaacgagagat
gaaactataacaccgggtggtctaatagctcgtcccggtttaaacaccctctttaaaaat
ccgcaattttacaatgataacccatatccgtacaataccaatacgagtcctattgaggcc
atccattgcccggatcattttcaatccatttacactcaattactatgtgggttttaccaa
cgtcatgacgtgacacgtgtcaaagtcatcttcggttcaaatctcatatgggccattcgc
tttctaaaggctaactattccaatctctgtcatgacatctcatcgggtaacctgaaccca
aaaataaccaacctgtctctacgtactcgtatgactgagaccttcatgcaacacccccaa
ccgaagttggccaagtttattgaaagtgcatgccttggaaaaaattgggaagggattttg
caaaagatttggcctaatgcaaagtacatagaagctatattaacgggctcgatgacccaa
tatataccgatactaaactattatagtggaggattatcattagtgactctgaattatgct
tcttctgaatgtgatttcggctataatttggacccgatgtgtggcccgtatgacatttct
tacaccataatgccaaatatggcctattacgagttcatacctctttcgcctgaagatgat
gtttcgggctcacaacctaaacccgtggatatggcaaatgtcgtggtggggcaagagtat
gagcttgtgatcacaacctataccggtttatataggtaccgaatgggagacgtgattcgt
ctaacagggttttacaattcgacacctcaatttaagttcataaggagaagagatgtggta
cttagcattgatgtcgagaaaacaaccgaatctgatttacataaggcaattcaaacggcg
tccattgtactccaacagtttaacacaacaatcctcgactacacgagcaattcatgtaca
aagaccaatccaggacactatgttatctacatagagctcataaccaaaaccctagcaaat
gggatcggccttggcgtaaacatcctggaagaatgttgtttggcaatggaggagtctcta
ggattttactatcggtcatgccgaaaaagctattgcataggtccgcttgagatccgagtg
ttaagtaacgggacgtttgaaaagatgatggattttgcaatatcaaatggagcgactttt
aaccaatttaagatgcctaggtgtgtgaaatcgttgtctatgttagagttactcgactct
agagtcatctcaagccacttcagcccttcaatgcctcatactcttccttaa
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