Silene latifolia (white campion): 141651838
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Entry
141651838 CDS
T11116
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase-like
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00240
Pyrimidine metabolism
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
141651838
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
141651838
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Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
141651838
NCBI-ProteinID:
XP_074315634
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Position
4:101503125..101515747
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AA seq
377 aa
AA seq
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MESANARLSNIQKHLNPQPCSSNHSQGKGGLIKISPEVSDALFLAAAVVALESTIICHGM
PYPQKLETAKEIEGIVRENGAVPATIAILDGIPHIGLDIEELEWLAKFGAQIRKTARRDI
AAVVPYFSNASLDIQTYTDSDDDSFLHFVQSQFLSHNFSRLLQEPNGATTVSATMFFASM
VGISVFVTGGIGGVHRHGEQTMDVSSDLIELGKNPFAVVSAGAKSILDIPRTLEYLVTHG
VCVAGYRTNEFPAFFTETSGCKVPCRLNSPQDAARLIEANMKLELGTGILIAVPIPKEHS
ASGTFVESAIQRALKEAREKNITGSAETPFLLSRVNELTGGASLASNIALVKNNAIIGSK
IAVRLAQLGGYGGDDKS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagcaaatgcaagactatccaatattcaaaaacatctaaaccctcaaccctgt
tcatctaatcactcccaaggtaagggtgggttgatcaaaataagccccgaggtgtctgat
gcattgttccttgctgctgctgttgttgctcttgaatctaccattatttgccacggaatg
ccttatcctcagaagttggaaactgccaaggagattgaaggaatcgtaagagaaaatgga
gctgttccggcaaccattgccatactggatggaatcccacacataggtcttgacatcgag
gagttggagtggcttgcgaagtttggagcccaaatccgaaaaactgctcgtcgcgacatt
gccgctgttgtaccttatttctcaaatgcttcgctggatattcaaacctatacggattca
gatgatgattcatttttgcactttgttcaaagccaatttttatctcacaatttctccagg
ttgctgcaggagccaaatggtgctacaactgtttcagcgacaatgttttttgcttcaatg
gttggcatttcagtctttgtgactggaggaatcggaggagtacacaggcatggtgaacaa
actatggatgtgtcatctgatctaatcgagctagggaagaatccttttgcagtcgtatcc
gctggtgctaaatcaatacttgacatacctagaacacttgagtatctggtgactcatgga
gtgtgtgttgctggatataggaccaatgagtttcctgccttctttactgaaacaagcggt
tgcaaggttccttgtcgacttaactccccacaagatgctgctcggttaatagaagccaac
atgaagcttgaacttggaactggcatactcattgcagttcccatccctaaagaacactct
gcctctggaactttcgtcgagtctgcaatccagcgagctttaaaggaagcaagggagaag
aatataacaggcagtgctgaaacccctttcttactttcgagagtgaatgaattaactgga
ggagcttcattagcttctaacattgctcttgtgaagaataatgccattattggctctaag
attgccgttcgtctggctcagttaggaggatatggcggtgacgacaaatcttga
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