Silene latifolia (white campion): 141652519
Help
Entry
141652519 CDS
T11116
Name
(RefSeq) putative galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00520
Amino sugar and nucleotide sugar metabolism
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
141652519
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
slaf01003
]
141652519
Enzymes [BR:
slaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
141652519
Glycosyltransferases [BR:
slaf01003
]
Polysaccharide
Structural polysaccharide
141652519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
141652519
NCBI-ProteinID:
XP_074316136
LinkDB
All DBs
Position
4:2164531..2170327
Genome browser
AA seq
609 aa
AA seq
DB search
MKRCRKWQRIFILVLLSISVFAPIVFVSNNLKPLSSKAGIKQFDDLDDLSNMIHKKPDLI
QLHAVEQEASEDVKEPRQEVYRDQNYSVVSSGDGNKDEVSSFEGLRTGDREMMSEPDQRA
NERSFREEIKQVQPKKGKEDNKDESNKKSNQPHHGLRRGRDSRSETQRTTDNRVVKMKDQ
VIRAKAYLSFAISSSNTHLVKDLRLRIKEIERVLGEPRRDSDLSRSALQKIKMMESTLSK
ASHAYPDCPGMVNKLRAMTHNAEDQVQSQRTQTTFLSELAGRTTPKGLHCLSMRLTTEYF
TLPPEQQRFPNQQNIQNQNLFHYVVFSDNVLAAAVVVNSTVSNALEPEKIVFHVVTDSLN
FPAISMWFLLNPPEKATIQVLSASNFQWLSALKSSLEKQSSSDSKYSSLLNHLRFYLPEI
FPQLDKVVFLDHDVVVQRDLSSLWGVDMKGKVNGVVETCEPGESSYRRMDMLVNFSDPLV
SRKFDANSCTWAFGMNLFDLRQWRHHDLTSTYRRFLLKGNEKPLWKTGSLPLGWVTFYNR
TIALDPRWHLLGLGFDSQIKTDQIEQAAVIHYDGIMKPWLDIGIRKYKGYWNQYVKFDHP
YLLQCNLQE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctgtagaaaatggcagaggatcttcatcctcgttcttctttcgatctctgtt
ttcgctccaattgttttcgtatctaataatctcaaaccgctttcttccaaagcaggaatc
aaacaattcgacgacctcgatgatttgtcaaatatgatacataagaagccagatttaata
caacttcacgcagttgaacaggaagcgagtgaggatgtgaaagaacctagacaagaagta
tatagagatcagaattacagtgtagttagttctggtgatggtaataaggatgaagtttcg
agttttgagggtttaaggactggtgatcgtgagatgatgtctgaacctgaccaaagagct
aatgagcgcagctttcgtgaggaaatcaaacaagttcaaccaaagaaaggaaaagaagat
aataaggatgagtcgaataaaaaatctaatcaaccgcatcatggacttcggcgtggaaga
gactcgcgtagcgagactcagcggactacagataatagagtggtgaaaatgaaagatcag
gtgatacgagcaaaggcgtacttgagttttgccatcagctcaagcaacacacatttagtg
aaagacttgaggcttcgtataaaagaaatcgaaagagtattaggtgaacctagaagagat
tcagacttatcacgaagtgctcttcagaaaataaaaatgatggaatccacgctgtcaaaa
gcaagtcacgcgtaccctgattgccctggcatggtaaataagctccgtgctatgacacac
aatgctgaagaccaagtccaatcgcagaggacacagacaacatttcttagtgagcttgct
ggaagaaccacgccaaaaggtcttcattgcctttctatgaggctcactactgagtacttc
actttgccacccgagcagcaaagattccccaatcaacagaacattcaaaaccaaaatctt
tttcactatgtagtcttctctgacaatgtcttagctgctgctgttgtcgtgaactccacc
gtttcaaatgctctggaacctgagaaaattgtcttccacgttgtgacagattctctgaac
ttccccgcgatctctatgtggttcttgttaaatcctcctgaaaaagccaccatccaggtc
ttgagtgcaagtaattttcaatggctgtcagcattaaaatcatcattggagaagcaaagt
tccagtgattcgaaatattcttctcttcttaatcacttgcgcttttatttgcctgaaatt
ttccctcaattggataaggttgtattccttgaccatgatgtggtagttcaaagggatttg
agtagtctctggggtgttgatatgaagggaaaggtcaacggagttgtggaaacatgtgaa
ccgggagaatcgtcctataggaggatggatatgttggtcaatttttcagatccactggtg
tccaggaagtttgatgccaattcatgtacatgggcatttgggatgaatttgtttgatcta
agacagtggaggcaccatgatctgacttcgacctatcgtagattcctgctgaagggcaat
gaaaagcctctttggaagacagggtctttgcccttaggatgggtcacattctataatcgg
acaatagctttggacccacgatggcatcttctcgggctgggattcgattcacagattaag
actgaccaaattgaacaggcagcagtcatacattacgatggcatcatgaaaccatggttg
gatatcggaattagaaagtacaagggatactggaaccagtacgtcaaatttgatcatcct
tatttgctacagtgtaatcttcaggagtaa
DBGET
integrated database retrieval system
