Silene latifolia (white campion): 141652688
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Entry
141652688 CDS
T11116
Name
(RefSeq) tRNase Z TRZ1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141652688
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
141652688
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
141652688
Prokaryotic type
141652688
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
141652688
NCBI-ProteinID:
XP_074316361
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Position
4:5442582..5448306
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AA seq
286 aa
AA seq
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MEKKEEKQINEGLKIEGYKIEGISIGGQETCIIFPSLSLAFDIGKCPRLAVNQEFLFISH
GHLDHIGGLPMYVSMRGLLSMKPPTIIVPKSIKENVERLFDVHRAIDQSELNHKLVGLDV
GEEFYIRKDLKVKAFRTHHVIPSQGYVVYSFKQKLKPKYIGLPGNEIKELKTSGVEITDT
SCSPEIAFTGDTTAEFIVDPSNVDVLRAKILVMECTFVDDRATVAHAKDYGHTHLAEVVK
YTEMFQNKAILLTHFSARYQADEIREAVSRLPEAFAGRIFTLTEGF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggaggagaagcagattaatgaaggtttaaagattgaaggatataaaatc
gaaggaatttcgattggtggacaagaaacttgcataattttccctagtcttagcctcgct
ttcgatatcggaaaatgtcctcgtctcgctgttaatcaagaatttctcttcatttctcat
ggacacttggatcacattggtgggctgcctatgtatgtatcaatgcgtggcttattgtcg
atgaagcctccaaccataattgtgcctaagtctataaaagagaatgtggaacgacttttt
gatgtgcatagagcaattgaccagtctgagttgaatcataaattagttggtctcgatgta
ggagaagagttctacattcgaaaggatctaaaagtgaaagcgtttagaacacatcatgtc
atccctagtcagggttatgttgtttattcattcaagcagaaactcaagccgaagtatatt
gggcttcctggaaatgaaatcaaggaattaaagacttctggtgtcgagattacggatacc
tcctgttcacctgagatagcattcactggagatacaacagctgaatttattgttgatcca
tctaatgttgatgtgctaagagcaaagattcttgtaatggagtgcacctttgtagatgac
agagctactgttgcgcatgcaaaagattatggacatacacatcttgcagaggttgtaaaa
tatacagagatgtttcagaataaagcgattcttctcacccatttctcagcaagataccaa
gcagatgaaataagagaagctgtgtccaggttgccagaagcatttgctgggcgaattttt
acccttactgaagggttctaa
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