Silene latifolia (white campion): 141652806
Help
Entry
141652806 CDS
T11116
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141652806
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP100
141652806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
UVR
TniB
AAA_18
NBD_SMAX1
AAA_14
NACHT
RNA_helicase
AAA_25
AAA_7
Zeta_toxin
AAA_24
IstB_IS21
Torsin
Motif
Other DBs
NCBI-GeneID:
141652806
NCBI-ProteinID:
XP_074316512
LinkDB
All DBs
Position
4:8297709..8305048
Genome browser
AA seq
921 aa
AA seq
DB search
MAGALLQSIITPALFTYQRNVQFQRSGNSRKAVKMMAFLQTPGYQMKSFSGLRIGNSLDT
LGSTNDCFYTKMRAVISVRREKTSRVVVRAMFERFTDKAIKVILLAQEETRRVGHNFVGT
EHILLGLIMEGTGIASKVLKSMGINMKDARVEVEKIIGRGSGFVAVDIPFTPRAKRVLEL
SLEEARQLGHNYIGTEHLLLGLLREGEGVAASVLENLGADPRNIQIQVIRMVGENTEAVG
AGVSGGTTGSKMPTLEEYGTNLTKLAEEGKLDPVVGRQLQIERVVQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIDGKQVITLDMGLLVAGTKYRGEFEERLKKLMDEV
KQNDKIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVRVPEPTVDECIQILRGLRERYEIHHKLRYTDEALKAAAQLSYQYISDRFLP
DKAIDLLDEAGSRVRLRHAKLPEEARELEKELRQITKEKDEAVRGQEFEKAGELRDREID
LRIQMNALIEKNKEMSKAEAEAGDVGPVVTEVDIQHIVASWTGIPVDRVSSDESERLLKM
EETLHSRVIGQDEAVKAISRAIRRARVGLKDPNRPIASFIFSGPTGVGKSELAKSLASYY
LGSEEFMIRLDMSEYMERHTVSKLIGSPPGYVAYTEGGQLTEAVRRRPYSVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGKTVDFKNTLLIMTSNIGSSVIEKGGRKIGFDLDYDEKD
NSYNRIKSLVTEELKQYFRPEFLNRIDEMIVFRQLTKLEVKAISDIMLKEVFERVKSKEI
EIQVTEKFRDRVVEEGYDPSYGARPLRRAIVRLLEDRMAEKILSGEIKEGDSVIVDVDSD
GNVVVLNGSSSGALPKSAIVS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctggggctttacttcaatcaattattacaccggctttatttacctaccaaagaaat
gtacaatttcagagatcaggaaacagtcggaaggctgtgaagatgatggccttccttcaa
acacctggatatcaaatgaaaagtttctctgggctgcgaattggtaattctttggatact
ttgggatctactaatgattgcttctataccaaaatgagggcggtgatatctgtacgaaga
gagaaaaccagccgcgttgtagtcagagcaatgtttgaacgtttcaccgataaagctatc
aaagttattttgcttgctcaagaggagacaagacgggtaggacataattttgtaggcaca
gagcacattcttttgggtcttattatggaaggcactggtatagcttcaaaggtactgaaa
tcgatgggaattaatatgaaagatgcacgtgttgaggttgagaaaataattggacgtgga
agtggttttgttgctgttgatattccattcactcctcgtgctaagcgggtgttggaactt
tcgctggaggaagctcgccaacttggtcacaactatattggaactgaacatttgcttttg
ggtcttcttcgagagggtgaaggagtggctgccagtgttctagaaaacttgggcgctgat
ccacgtaacattcagatacaggttattcgtatggtgggtgaaaacacagaagctgttggt
gctggtgttagtggaggcactactggcagtaagatgccaaccttggaggagtatggaaca
aatctgacaaagctggcagaagagggaaaattggatcctgttgttggaaggcagctacag
attgagcgtgtcgttcaaattctcggtaggagaacaaagaacaacccttgtcttattgga
gagccgggagttggaaaaacagcaattgcagagggccttgcacaaagaatcgcaaatggt
gatgttcctgaaacaattgacggaaagcaggttataactcttgatatgggtctcctggtt
gctggaacaaaataccgtggagagtttgaggaaagactgaagaagttgatggatgaagtt
aagcagaatgataagattattctgtttattgatgaggtgcacactttgattggagccgga
gcagcagaaggagctattgatgctgctaacatcttaaaaccagctcttgcgagaggtgaa
ttgcagtgcattggagccaccactcttgatgaatacagaaagcatatcgagaaagatcca
gcgttagagagaaggtttcagcctgttagagtgcccgaaccaacagtagatgaatgcata
cagattctaagagggcttcgtgaacgctatgagatacatcataagcttcgctacacagat
gaggccctcaaggctgcagcacagctttcataccagtatatcagcgaccgtttcctgcct
gataaagctattgacctacttgatgaagctggttctcgggttagactgcgtcatgcaaag
ctgccggaagaagctagggagcttgaaaaagaactccgacaaattacaaaggaaaaggac
gaagctgttcgaggacaggaatttgaaaaggctggagaattacgtgaccgagaaatagac
ctcagaatccaaatgaatgctcttatagagaaaaacaaggaaatgagcaaggctgaagca
gaagcaggtgatgtgggccctgttgtgacagaagtagacattcaacacattgttgcttct
tggactggtattcctgttgacagagtatcttcagatgaatctgagcgtctcctcaaaatg
gaagaaacccttcattcgagagttatcggtcaagacgaggctgtaaaagctattagtcgt
gccattcgccgtgctcgtgtaggtctcaaagacccgaatcgtcccattgcaagtttcatt
ttctcgggtcccactggtgttggaaaatccgaactagcaaaatccttagcttcgtactac
ttaggatccgaagaattcatgattcggcttgatatgagtgagtacatggagagacacact
gtttccaaactaattggatctccacccggttatgtcgcttacacggagggtggccagctc
actgaggctgttcgacgtcggccttactcagtggtgctcttcgatgaaatcgaaaaggct
caccctgatgttttcaacatgatgcttcaaatacttgaagatggaaggttgactgacagc
aaaggaaagacagttgacttcaagaacactctcctaatcatgacatcaaacattggaagc
agcgttatcgagaaaggtggccgaaagattgggtttgacttagattatgatgagaaagac
aacagctataatagaataaagagcctggtgaccgaggagttgaagcaatacttcaggccc
gagttcttgaacagaatagatgaaatgatcgtattccgacagcttacaaagctagaggtg
aaggcgatttcagacataatgctcaaggaagtgtttgagagggtcaagtccaaggagatt
gaaattcaagtgactgagaaatttagagaccgagtggtggaagagggttacgatcctagt
tatggagctaggcctttgagacgagccattgttagacttcttgaggaccgtatggccgag
aaaatactttccggagaaattaaggagggtgattctgtgattgtggatgtggactcagac
gggaatgttgttgttcttaatggtagcagcagcggtgccttacccaagtcggccattgtt
tcttga
DBGET
integrated database retrieval system
