Silene latifolia (white campion): 141652815
Help
Entry
141652815 CDS
T11116
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00600
Sphingolipid metabolism
slaf01100
Metabolic pathways
slaf04382
Cornified envelope formation
Module
slaf_M00094
Ceramide biosynthesis
slaf_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
141652815
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141652815
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141652815
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
141652815
Amino acid related enzymes [BR:
slaf01007
]
Aminotransferase (transaminase)
Class II
141652815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
141652815
NCBI-ProteinID:
XP_074316522
LinkDB
All DBs
Position
4:complement(8564577..8571152)
Genome browser
AA seq
489 aa
AA seq
DB search
MITIPYLTALSTYLSYSLLFIFGQIRDFFRKLINWNHSKDLQGYAPICLDSEDFYTRRLY
LRIQDCFGRPIASAPDAWFDVVERFSNDRNKTLKRTNKIKSCLNLGSYNYLGFAAADEYC
TPRAIESLKQFSASTCSPRVDGGTTILHSELEECVAKFVGKPSALVFGMGYATNSAIIPV
LVGKGGLIISDSLNHSSIVNGARGSGANISIFQHNIPSDLERVLREQIAEGQPRTHRPWK
KIIVIVEGIYSMEGELCKLPEIVSVCKKYKAYVYLDEAHSIGAVGKSGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYGTSISPPAAQQIISSIKVLLG
EDGSSRGAQKLATIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPSKIPAFSRECLK
QNVAVVVVGFPATPLLLARARICISASHSKEDLVKALEVISNVGDLVGIKYFPAEPKKMD
WEVGTLKLE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgattacaattccatatttgacagcattatcaacctatttaagttacagtttattattc
atttttggtcaaatccgtgatttcttccgtaagctcatcaattggaaccattctaaggat
ctccagggttacgcgcctatatgcttggattccgaggatttctatactcgacgcctctat
cttcgtattcaggattgctttggaaggccaattgcaagtgctcctgatgcttggtttgat
gtggtggaacgtttttcaaatgatcgtaacaagactttgaaacgcaccaacaaaatcaag
agttgtcttaacttgggttcatataattaccttggattcgcggcagctgatgagtactgt
acaccccgtgcgattgaatcactaaagcaattttccgcaagtacctgcagtcctcgtgtc
gatggaggtactactatactgcactctgaactggaggaatgtgttgctaaatttgttggg
aaaccgtccgctttagtctttgggatgggctatgccacaaattctgctattattcctgtc
ctggttggaaagggtgggctgataattagcgattctctgaatcacagttctattgtcaac
ggtgctcgtggatcaggggctaacatttccatctttcaacacaacattccttctgacctc
gagagggttttgagggagcaaattgctgagggtcaacctaggacacatcgaccttggaag
aaaatcattgtcattgtggaaggcatatacagtatggagggagagctttgtaagcttccg
gagattgtttcagtatgtaaaaaatacaaggcatatgtttatctagatgaagcgcacagc
attggggctgttggaaagtctggcagaggtgtttgtgaactcttaggagttgatacagct
gacgtggatatcatgatgggaacatttacaaaatcttttggatcttgtggtggttatatt
gctggctcaaaggaacttattcaatatcttaaatacacatgtcctgctcatctttatgga
acatcaatatcgccaccagctgcgcaacaaattatatcttcaatcaaagtccttcttgga
gaggatggttcctctagaggtgcacaaaaacttgccacaatacgtgaaaacagcaacttc
tttcgatcagagctgcagaaaatgggctttgaggtacttggtgataatgattccccggtg
atgcccattatgatctacaacccttccaaaattcctgctttttctagggagtgccttaag
caaaatgtggctgtcgtggtggttggatttccagctacacccctattgttggcaagggcg
cgtatatgtatatctgcttctcactcgaaagaggatctggtcaaggctttggaggttata
agcaacgttggcgacctagttgggatcaagtacttccctgccgagccaaagaagatggat
tgggaagtcgggacactgaagctggagtag
DBGET
integrated database retrieval system
