Silene latifolia (white campion): 141653174
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Entry
141653174 CDS
T11116
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00531
Glycosaminoglycan degradation
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
141653174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slaf00536
]
141653174
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
141653174
Glycosaminoglycan binding proteins [BR:
slaf00536
]
Heparan sulfate / Heparin
Enzymes
141653174
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Peptidase_C4
Motif
Other DBs
NCBI-GeneID:
141653174
NCBI-ProteinID:
XP_074316953
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All DBs
Position
4:<18712965..18716779
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AA seq
541 aa
AA seq
DB search
MESRLLFCLLFACISSILAQEIAEAALGIDGSLAIAHTNENYVCATIDWWPHTKCNYEDC
PWGYSSIMNLNLSNPLLAKAVQAFGNLRLRLGGSLEDQVLYDVPSLKLPCHPFWKQSDGL
FGFSRGCLHIGRWDMLNHFFKKTGAIVTFGINALYGRRKSKNGAWVGPWDSSNAQDFIKY
TISKGYEIDSWEFGNELCGNGVGARVDAAQYAKDLIMLNGIINELYKNSHSKPLLLAPGG
FFDKDWFTKLLKNTGPGVVNSVTHHIYNLGAGNDPNLVSKMLDPNFLNKISETFSDVNET
LETAGPWTRSWVGESGGAYNSGGKLVSDTFVNSFWYLDQLGLAATYNTKVYCRQTLIGGN
YGLLNTTTFAPNPDYYGALLWNRLMGHKVLPVNILASPYLRSYAHCTKGRAGITVLLINL
SNQTSVLVKVQDTMEKDLQIANKVIPKESSFTRTIKKTVSWVGSKASDGQLHREEYHLTA
KDGSLRSQTVVLNGKPLEITENGNIPRLEPVLVNVNSPLYISPLSIAFIVFPNFDAPACN
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccggctccttttctgcttactgttcgcttgtatttcgtctattttggctcaa
gaaatcgcggaagctgcgttgggaattgatggaagcttagctattgctcacactaatgag
aattatgtgtgtgccactattgattggtggcctcataccaaatgtaactatgaagattgc
ccatggggatactcttctataatgaatctcaatttatctaatccgcttcttgcaaaggcg
gtgcaagctttcggaaatttgagattaaggcttggaggttccctggaagatcaagtcctt
tatgatgttccgagtttgaagctcccttgtcatccattttggaaacaatctgatggatta
tttggcttttcgaggggatgtctgcacattggccgctgggacatgcttaatcattttttt
aaaaagacaggagcaattgtaacctttggcataaatgcactgtatgggaggcgaaagtcc
aaaaatggcgcttgggtgggaccttgggactcgagtaatgcacaagatttcattaagtac
acaatctccaagggatacgagattgattcatgggaattcggaaatgaactgtgtggaaac
ggagttggtgcaagggttgacgctgcacagtatgccaaagacctgataatgctaaacgga
atcatcaacgaattatacaagaactcacactcaaaaccgttgcttttagccccgggagga
tttttcgacaaggattggtttactaagctccttaagaatacggggcctggagtagttaat
tccgttactcatcatatttacaatctcggggcaggtaatgaccccaatctggtgagcaag
atgctggatcctaatttcctgaataaaatatcagaaaccttcagtgatgttaatgaaaca
ttagaaacagccggtccttggactcgttcttgggttggtgagtcaggtggtgcttacaac
agcggaggcaaactagtttctgatacctttgtcaatagcttctggtacttagatcagctg
ggactggctgctacatacaacaccaaagtgtattgccggcagacattgattggtggtaat
tatggcctcctcaatacaaccacatttgccccgaacccagattattatggggcgcttttg
tggaatcggttgatgggacacaaggtccttcctgtcaatattcttgcttcgccttatcta
cgctcgtatgcccattgtacaaaaggaagggcaggtataactgtacttttgataaatctt
agcaaccagacaagtgttctagtcaaagtgcaagacacaatggaaaaggacttgcagata
gccaacaaggtcatcccgaaagaaagttctttcacgcgaactataaaaaagacggtgtct
tgggtaggaagtaaagcttcagatgggcaattgcacagagaagaatatcatttgacggcc
aaagatggatccctgcggagccaaaccgtggttctgaatgggaaacctttggagatcaca
gaaaacggaaatattccgagactggaacctgttctagttaatgtgaattcccctctatac
atatctcccttgtctattgctttcatagtttttcctaactttgatgctccggcatgcaat
ttgtga
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