KEGG   Silene latifolia (white campion): 141653204
Entry
141653204         CDS       T11116                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf00040  Pentose and glucuronate interconversions
slaf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    141653204
Enzymes [BR:slaf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     141653204
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 141653204
NCBI-ProteinID: XP_074316991
LinkDB
Position
4:20763131..20765268
AA seq 443 aa
MESINNDVKLRLLSLIIFSCILVGEANIGHFDDHWLRRQEAAKKAANASYDPNPHNVTNH
LNRQVHKALNESDEASTRRGLFGSLYKGECLAANPIDRCWRCDPNWAQNRQKLADCVLGF
GHKVRGGQGGEIYVVTDNTDTDLVNPKPGTLRHAVIQKEPLWIIFKHGMVIRLSEELMIS
ANKTIDGRGGHVHIAGGAGLTVQFVDNVIIHNIHVHDINPGGGGMIRDSIEHYGFRTRSD
GDGISLYGATNVWIDHVSMSNCADGLIDAIEMSTAITISNCHFTDHNDVMLFGAKDERSE
DKIQQITLAFNHFGKRLIQRMPRCRWGFFHVVNNDYTHWEMYAIGGSQNPTIICQGNRFI
APPNPFAKEVTKRDFAPDYEWKTWLWVSENDVMINGAYFRGSGDKSKMASFTKQDMISAK
PGTYVRRLTRFSGALLCKEGSPC
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggagtcaattaataatgatgttaaattaaggttactttccttgatcattttttcatgc
atccttgttggagaagctaatataggccattttgatgatcattggctaaggcgacaggag
gcggctaagaaggcggccaacgcctcgtacgaccccaatccacataatgtcacaaaccac
cttaatcgtcaagtccacaaggcattgaatgaaagcgacgaagcaagtacaaggagaggc
ctatttgggagcctgtacaaaggcgaatgcttagccgccaacccaatcgacaggtgttgg
cgatgtgacccaaactgggcccagaaccgtcaaaagctagccgattgcgtactaggtttc
ggtcacaaggttcgaggaggacaaggtggtgaaatatacgtggtgacggacaataccgac
actgatttagtaaacccaaagccagggaccttacgtcacgctgtcatccaaaaagagccc
ttgtggatcatctttaagcatgggatggtaattaggcttagtgaagagcttatgatttcg
gctaataagacgattgacggacgtgggggccacgtacacattgccggtggggccgggttg
acggtacaatttgtggacaatgtgatcatacataatattcatgtacatgatattaaccca
ggtggtggaggaatgattagggactctattgagcactatgggtttcgaactcgtagcgac
ggtgacggaatttcattgtatggagctactaatgtttggattgatcatgtttctatgtct
aattgtgcggatggtttgattgatgctattgagatgtctactgctatcaccatctcaaat
tgtcatttcactgaccataatgatgtaatgttgtttggagcgaaagacgaaagatcagaa
gacaaaatccagcaaataacattggccttcaaccactttggtaagcgtttgatacaaagg
atgccaaggtgcagatggggattctttcatgtcgttaacaacgactacactcactgggaa
atgtacgccattggcggtagccaaaatccgactatcatttgtcaaggaaatcgattcatc
gctccccctaacccctttgctaaagaggtgacaaagagggattttgcgccggactatgaa
tggaagacttggttgtgggtatcagaaaatgatgtaatgataaacggagcatacttcaga
ggatcaggtgataagagcaagatggcctccttcactaaacaagatatgattagtgccaaa
cccggaacctatgtcaggcggctcactcgcttctccggtgccctgttatgtaaagaaggc
tcaccgtgttag

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