Silene latifolia (white campion): 141653341
Help
Entry
141653341 CDS
T11116
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141653341
Enzymes [BR:
slaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
141653341
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
141653341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
141653341
NCBI-ProteinID:
XP_074317168
LinkDB
All DBs
Position
4:complement(28081040..28089358)
Genome browser
AA seq
416 aa
AA seq
DB search
MITTNTLKRKRDPHPQTNDPNLESATATTTATTAAMDTIVWQTPTNPPHRDDYIFHKGMR
YVKPYYFEFICHGKNRWTGKTIVDMFTDEFRGRPRDYYVRAVKSGRILVGGKTVSIYHRI
KSSEKISHFVHRHEPPVMAWDVSVLQEGEDVLTVCKPASIPVHSCGQYRKNTVIGILEAE
YGFAPLFPIHRLDRLVSGLLILARTASKADTFRQQIEGGLVKKQYVAKVVGIFPEGEIIF
SLQKVVDANINHDPREGRSAAEVGDGLADVKLKGKISLTKFRRLHTDGVHSIVQCEPLTG
RTHQIRVHLQHIGHPIANDNMYLGESISRRSTEGRSADRTAAKSGDSLSSSACENNVELE
EESSAEFSIDPMCTNCPNLAPQGYGDHEEGLWLHCVRYSGPDWSYECPLPDWAAHL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgataacaaccaacactttgaagaggaaaagagacccacaccctcaaaccaacgaccct
aacctagaatccgccaccgcaacaaccaccgcgacaaccgccgccatggacaccattgta
tggcaaaccccaacaaaccctcctcatcgcgacgattacattttccacaaaggaatgcgc
tacgtcaagccgtattacttcgagttcatttgtcatgggaagaatcgctggacgggtaaa
actatagttgatatgtttactgacgagttcagaggacggcctcgtgattattatgtaaga
gctgttaaaagtggaagaatacttgttggtgggaaaactgtctcaatctaccacagaatt
aagtcgtcggagaagataagccactttgttcacaggcatgaaccacctgtaatggcctgg
gatgtctcggttctgcaggaaggcgaggatgtgttgacggtctgcaagcctgcatctatt
cctgttcattcttgtggtcaatatcggaaaaatacagttatcggcattctcgaagcagaa
tatggttttgctccacttttccctatacatcgattggaccgcctggtctcaggactattg
atattggccagaactgcttctaaggctgatactttcagacaacagatcgaaggagggctc
gtgaagaaacagtacgttgccaaggttgttgggatatttccagagggtgagataattttt
tccttgcagaaagttgtggatgccaacataaaccatgatcctagagaaggaagaagtgcg
gctgaggtaggagatggtttggctgatgttaagttgaaaggcaaaatttctcttacaaag
tttagacggcttcatactgatggtgttcacagcattgtgcaatgtgaaccactcactggc
cgaactcatcagatacgggtacatctccagcatattggccatccaatcgccaatgacaac
atgtatcttggtgaatcaattagtcgacgttctactgaaggaagaagtgctgatagaact
gctgcaaaatctggggactctttgtcatcttctgcttgtgagaacaatgttgagcttgag
gaggaatcctcagcagaatttagcatcgatcctatgtgtactaattgcccaaatttggca
cctcaagggtatggtgaccatgaggaaggcttatggctacactgcgtaagatatagcgga
cccgactggagttatgaatgcccacttcctgattgggccgcccatctctga
DBGET
integrated database retrieval system
