Silene latifolia (white campion): 141653402
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Entry
141653402 CDS
T11116
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141653402
Enzymes [BR:
slaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141653402
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
141653402
NCBI-ProteinID:
XP_074317257
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Position
4:33534147..33541416
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AA seq
447 aa
AA seq
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MAEISSKRFAFFTLFTFVIFLGFVNGRLQHNQDFLNSRIEEQLKSLKNSSMADRVKEVEM
RNDQAVAKQPHEIVSMVQESISNSTARRNLGYFSCGTGNPIDDCWRCDPNWQKNRKRLAD
CAIGFGRNAVGGRDGRYYVVTDPGDNDAVNPTPGTLRHAVIQEEPLWIIFKRDMVITLKQ
ELIMNSFKTIDGRGYNVHIANGACITIQYITNVIIHGLNIHDCKPTGNAMVRSSPTHFGW
RTIADGDGISIFGASHIWIDHNSLANCADGLVDAVMASTAITISNNYFTHHNEVMLLGHS
DSYEGDKIMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYLAPVNPFAKEVTKRVEGDTGGWKSWNWRSEGDLLLNGAFFTASGSGAGASYARASS
LSAKPSSLVAELTSGAGTLNCRRGRQC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatttcgtcaaaacgtttcgcctttttcacattgttcactttcgtcattttt
ctcggtttcgttaatggcagattacaacataatcaagacttccttaactctaggattgaa
gaacaactgaagagcttgaagaactcatcaatggcggatagggttaaggaggttgaaatg
agaaatgatcaagcggtggccaaacaaccacatgagattgtttccatggttcaggagagt
attagcaacagtacagcaaggagaaacctaggctatttctcatgtgggacaggcaaccca
attgatgattgttggagatgtgatcctaactggcaaaagaatcgaaagcggcttgctgac
tgtgccattgggtttggtcggaatgctgttggaggacgtgatgggagatactacgtggtg
actgacccaggtgacaatgacgcagttaatcccactcccgggacccttcgccatgctgtc
atccaggaagaaccactgtggattattttcaagagggacatggttatcaccctgaaacaa
gagctaatcatgaacagctttaaaactattgatggtaggggatataatgtacatattgcc
aatggagcttgcattacaatacagtacattactaatgtgatcatccacggtctcaacatc
cacgactgtaagccaactggtaacgctatggttagaagctcgccaacgcattttggatgg
agaaccattgctgatggtgatgggatttccatctttggtgccagccacatttggattgac
cataattctcttgctaattgcgctgatggacttgtcgacgctgtcatggcctccacagca
atcaccatttctaacaactacttcactcaccataatgaggtgatgttacttggtcacagt
gactcgtacgaaggggataagataatgcaggtaaccattgcctacaaccactttggagaa
ggccttatccagaggatgccacggtgcaggcatgggtacttccacgtcgtgaacaatgac
tacacccactgggagatgtacgccattggaggcagtgccaatcccaccattaacagccag
ggtaacagataccttgcccctgtcaaccctttcgccaaagaggtgactaagagggtggaa
ggcgatacgggcgggtggaaaagctggaactggagatcagaaggtgatctacttctaaat
ggcgcttttttcactgcctcgggatcaggagccggtgccagctacgcgagggcgtccagt
ttgtcagcaaagccatccagcctcgtcgctgagctcacatcaggtgctggtactcttaat
tgtcggcgaggccgtcaatgctag
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