Silene latifolia (white campion): 141653624
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Entry
141653624 CDS
T11116
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141653624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141653624
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
141653624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
YceD
Motif
Other DBs
NCBI-GeneID:
141653624
NCBI-ProteinID:
XP_074317553
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Position
4:complement(98111458..98117477)
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AA seq
252 aa
AA seq
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MATKLGTTYSPCTQKKKQQNPSFKDLDGVRADGRGIYECRPAFLRTTAVNAAAGSAYAEF
GNTKVIVSVFGPRESKKAMMYSDTGRLNCSVSYAPFATPVRGQVSEHKEFSSMLHKSLEG
SIIMESFPKTTVDVFALVIESGGSDLPVIISCASLALADAGIMLYDLVTAVSMSSLGTNL
IIDPLLEEESCQDGSLTLTYMPSRSEVTQLTITGEWTTSKVHEGMKVCLDACKKLGEIMR
LCLKEAASTSDD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaagttagggacaacatattccccttgtacccaaaagaagaaacaacaaaac
cctagtttcaaagatttagatggagttcgagctgatggtcgtggcatttacgagtgtcgc
cctgctttcttaaggacaactgctgtcaatgccgctgctggttctgcctatgctgagttt
ggtaacaccaaagttatcgtctccgtatttgggcctagagaaagtaagaaggcaatgatg
tacagtgacacaggccggttgaattgcagcgtcagctatgcaccttttgctacccctgtt
cgaggacaggtttcagaacacaaagagttttcgtctatgcttcacaaatctttggagggt
tcgataataatggagtcctttcccaagacaacggttgatgtttttgcattagttattgaa
tccggtggaagtgatcttccggttattatatcatgtgccagtcttgctctagctgatgct
gggatcatgttgtatgatctggttactgcagtttctatgtcttcccttggcaccaacttg
atcattgatcctctgctggaggaggaaagctgccaagatgggagtttaacgcttacctat
atgccttctcgttccgaggtcacccagttgactataactggagagtggactacctcaaaa
gttcacgagggaatgaaggtgtgccttgatgcctgcaaaaagctaggggagatcatgaga
ttgtgcctcaaggaagctgcttcgacttcagatgactaa
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