Silene latifolia (white campion): 141653628
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Entry
141653628 CDS
T11116
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141653628
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141653628
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141653628
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141653628
03041 Spliceosome [BR:
slaf03041
]
141653628
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141653628
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
141653628
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141653628
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141653628
Spliceosome [BR:
slaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141653628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141653628
NCBI-ProteinID:
XP_074317560
LinkDB
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Position
4:complement(98901870..98905637)
Genome browser
AA seq
331 aa
AA seq
DB search
MDEGLVDEIIRRLVEAKNGRTVRPVNLQESEIRQLCIASKDIFLSQPNLLELEAPIKICG
DVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRYNVRLWKTFTDCFNCLPAAALIDEKILCMHGGLSPDLKNL
DQIRNIARPVDVPDQGLLCDLLWADPEKELGGWGENDRGVSYTFGADVVSEFLEKHDMDL
ICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKALEKKG
KMDFSNHMLRPGTPPRKFSFSGWEGLADYNL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggggttagtagatgaaatcatacggaggttagtggaggcgaagaatggtaga
acggttcgacccgttaatcttcaagaatccgagattcgtcagctttgtattgcttctaag
gatatctttctaagtcaacctaatttgcttgaacttgaagctcctatcaaaatttgtggt
gatgttcatggtcagtactctgatcttcttcgattgtttgagtatggtggtttgcctcca
gaggcaaattatctgtttcttggagattatgttgatcgtggtaagcagagcatagaaacc
atttgccttcttcttgcatacaagattaagtataaggagaatttctttcttcttagggga
aaccatgaatgcgcttccatcaatcgcatatatgggttttatgacgagtgcaagagaagg
tataatgtccgcctgtggaaaacattcacggattgctttaattgcctgccagctgccgcc
cttattgatgaaaagatcttgtgcatgcatggaggattatctcctgatttgaaaaatttg
gaccaaatcaggaatattgctcgcccggtggatgtccctgatcaagggcttctttgtgat
ttattgtgggctgatcctgagaaagaacttggaggctggggagagaatgatcgaggcgtt
tcttacacttttggtgctgatgtggtttcagaatttcttgagaaacatgacatggacttg
atatgcagggcccatcaggtagtggaagatggttatgaatttttcgccgatcgccaactg
gtcaccatattttcagcacctaattactgcggggaatttgataatgctggagccatgatg
agcgtggatgattcactcacatgttcatttcagatcctcaaagctctggaaaagaaaggc
aaaatggattttagcaaccatatgttgagacctggaactccaccacgcaaattttctttc
tcagggtgggaagggttagccgattataacttgtag
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