Silene latifolia (white campion): 141653638
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Entry
141653638 CDS
T11116
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141653638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141653638
04131 Membrane trafficking [BR:
slaf04131
]
141653638
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141653638
Membrane trafficking [BR:
slaf04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
141653638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
WD40_Gbeta
Beta-prop_EML
DSE1_N
Motif
Other DBs
NCBI-GeneID:
141653638
NCBI-ProteinID:
XP_074317569
LinkDB
All DBs
Position
4:99899475..99903332
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AA seq
327 aa
AA seq
DB search
MEKKVATLERGTVCSAWNYNGIRLASGSVNGILSIFDPPDPASSSSSLSCSSSFKVNEVS
IVKVVWVPPEFGDAVACISADGSLSLWEEVMEAGQSLQWKFCTKFQSKTAGVLDIQFGGS
SNCLKLVIAFSDGYVKVYELLNPLELNTWQLQAEFQNVIDSVSKFTKVSCSSATLSWIPQ
RVETQQFSFVLGLNSDIPELNSPKVWEFDQMHQRWLPVAELALAEDSGESVHSVAWAPNI
GRPYEIISVATQKGIAIWNVGLNPDVDGRLSVEKVALLSGHQGEVWQMEWDMSGMTLASS
GSDGVVRLWQSNLNGVWHEQAILEPTS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagtggcgacattggagagaggaacagtatgttcagcttggaattacaac
ggtataagattagcaagtggttctgttaatggcatactctctatttttgatcctcctgat
cctgcttcttcttcttcttctctttcttgctcttcttcttttaaggtaaatgaagttagc
attgtgaaggttgtatgggttcctccagagtttggtgatgcagttgcgtgcatttcagct
gatggcagtttgtctttgtgggaagaagttatggaagccgggcaatctcttcaatggaag
ttctgcaccaagtttcagagtaaaactgccggtgtcttggatattcaatttggaggctct
tcaaattgtttgaagttggtaattgcgttttcagatgggtatgtgaaagtctatgaactc
cttaatccattggagttgaacacttggcaacttcaggctgagttccagaatgtgattgac
tcggtgtctaaatttacaaaagtttcatgctcatcagcaactttgtcatggattccacaa
agagttgaaacccaacaattcagttttgttcttggattgaactcagacatacccgaactt
aattctcccaaggtttgggagtttgatcaaatgcaccagaggtggcttcctgttgccgag
ttggctttagccgaagacagtggtgaatcagtacattctgttgcatgggctcccaatatt
ggaaggccttatgaaataatctcagttgcaactcaaaagggtatcgcaatatggaatgtt
ggtttaaaccctgatgtagatggacgtctgtcggtggaaaaggttgctttgctgtcaggc
catcaaggcgaggtgtggcaaatggaatgggacatgagcggaatgacattggcaagtagt
gggagtgacggggtagtgagactctggcaatctaatctgaacggtgtttggcatgagcaa
gcaattttggaaccgacatcttag
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integrated database retrieval system
