KEGG   Silene latifolia (white campion): 141653800
Entry
141653800         CDS       T11116                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52A-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141653800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:slaf04121]
    141653800
Ubiquitin system [BR:slaf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     141653800
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR19_1st EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML ANAPC4_WD40 WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st eIF2A WDR90_beta-prop_4th Beta-prop_HPS5 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_1st Beta-prop_WDR41 Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 KNTC1_N Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_VPS8 Aldo_ket_red Peptidase_M10_C Ge1_WD40
Other DBs
NCBI-GeneID: 141653800
NCBI-ProteinID: XP_074317755
LinkDB
Position
4:complement(109804763..109812943)
AA seq 519 aa
MLTMKDDPIPTPIPTRTPIPPLINYPSRMSRPSINISIERMLNTNHNPFSPSRTILTDRF
IPSRSSSHFSLFSLSSPSSSSKSTTSSSPTTPSTSSSFNNNTNYYYNNNNGSVSGKPDEI
REDGSAAYIAMLRAALFGPESGSFYPGTPDSGSPVNTNIFRYKTQTRRPMPSLLPFGPDD
SVPGVSYSPVKSPRKLPRSPHKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNAS
SSKVTKLCDLGLDDSVCSVGWAQRGTHLAIGTNEGKVQIWDASRCKNIRNMEGHRMRVGA
LAWSSSVLSSGSRDKNILQRDIRAKDDFVSKLAGHKSEVCGLKWSDDNRELASGGNDNRL
FVWNQHKTQPLLKYSEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSQLGCVD
TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPSMSKLATLTGHSYRVLYLAISPDGQT
IVTGAGDETLRFWNVFPSSKFQNTESEPRFRSHGRAQIR
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgttgaccatgaaagacgatccgattccgactccgattccgactcggactccgattcct
ccattgataaactacccatcaagaatgtcacggccatcaattaatattagtatagaacgt
atgttaaacacaaatcacaatccattttcaccatctcgtactatcttgactgaccgtttt
atcccatcaagatcttcttcacatttttctcttttttctctctcttctccttcttcttct
tctaaatcaaccacttcttcatctccaactactccttcaacttcatcttcttttaataat
aatactaattattattataataataataatggttccgtatctgggaagccagatgagatc
cgtgaagatggttctgccgcctacatcgccatgctccgggccgccttattcggtcccgaa
tctggttctttttatccgggtactcctgattctgggtcacccgtcaataccaatatattc
cggtataagacccaaacaaggagaccaatgccgtctcttttgccctttggtcccgacgat
tccgtccctggtgttagttatagtcctgttaagtctcctaggaagcttcctcgttctcct
cataaggtattggatgcacccgcattgcaagatgatttttatctcaatttagtggattgg
tcgtctcacaatgttcttgcagtcggattgggcaactgtgtctacttgtggaatgcttca
agtagcaaggtcacaaaattatgtgacttgggacttgatgatagtgtctgttcagtagga
tgggctcaacgggggacacatctagcaattgggactaatgaaggcaaagtccagatttgg
gatgcttctcgctgcaagaacattcggaatatggagggccaccgaatgcgtgtaggtgct
ttggcgtggagttcatctgtgctgtcatctggtagcagagataagaatattttgcaaaga
gatatacgtgcaaaagatgattttgtcagtaaacttgctggacacaaatcagaggtttgt
ggtctcaagtggtctgatgataatcgggaacttgcatcaggcgggaatgacaataggctc
tttgtgtggaaccaacataagactcaacctttgctgaaatattcagagcatactgctgca
gttaaagcaattgcctggtcaccccatcttcatgggctccttgcatcaggtggtggtaca
gctgataggtgcatccgtttttggaatacaaccacgaactcacagcttggatgcgtggac
actggtagtcaggtttgcaatcttgtttggtcgaaaaatgttaatgaacttgtcagcact
catggatattcccaaaaccaaataattgtgtggagatatcctagcatgtcaaagttggca
actcttactgggcattcgtacagagtactttatttagctatttcacctgatggacagacc
attgttactggtgctggagatgaaactctcagattctggaatgtcttcccttcttccaag
tttcagaacactgaaagtgaacccagatttcgatcacatggaagagcacaaattagatga

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