Silene latifolia (white campion): 141656273
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Entry
141656273 CDS
T11116
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141656273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141656273
03036 Chromosome and associated proteins [BR:
slaf03036
]
141656273
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141656273
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141656273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
141656273
NCBI-ProteinID:
XP_074319201
LinkDB
All DBs
Position
5:complement(714702..725865)
Genome browser
AA seq
956 aa
AA seq
DB search
MFGSSSPFGQSSSSPFGSQSVFGQTNVTNNSLTPQPFGQSSSSISSTPAFGAASSPGFGT
STPAFGSGGKSAFGQNSLGGFGSATQTSPFGSSTQQSQPAFGSNLFGSTAPFGAQSQPSF
GGTNTPAFGSSPSPSFGSSGTAFGVGGTPAFGSAGAFGSTNTSVFPAGGAPAFGTTTTSG
FGGTSTSPFGAASASAFGQSNSQAFGASGGAPAFGSTTPSFSFNSSPALGQSTPPFGSAP
QPFGTQGSSGAQAITPTFGSSGFGQPVQGGSRVTPYRATEDTDGTSNQPQGKLVSISAMQ
AYKDKNHEELRWEDYQRSDKGGPNSAGQTTSLSSGVPGAASNPFGSAASNPFGSSQTFGQ
SAGSPFSMSAPPTQTNLFTPTPAPFGGTGLATTTATFGSSPFGSAPTTTPSLFGSNPAQS
SSPFGTSTSAFASSPSIFGTASSTATGSSSLFGPSPGQGQSPVGTSAFGSQSSPLFQSSS
PSLGIGSGLGQTSSIFPQTGNFSNAFNTTSNSFGTSGFQNSSLTTGGQLGFSQSTPSLSS
FQPSLASQTNSGFNLSNAGQTQAGGAPSIFGQNLGQLSNQSSAVLQPVAITNPFGTLPAT
PHISIGNSGTSPSIQYGISSMPVVDKPSPVRVSSLLTPRHLSQRRIRLPARKYHPKNDGS
RVAFFNEDDEAPSTPKADALFIPRENPRALTIRPVDHWPKPSKKEASVLVFENGKSSSEN
QHSVNGSVAEENNSIANGNGFIKHQSNSVKISEKPNGRCDNKTNQQGDSYITRSGNRGDD
AAIIYEHGADVEATMPKLRHAEYYTEPQIQELAAKERLKPGYCRHVKDFVVGRQGYGSIK
FLGETDVRRLDLESIVQFNDREVIVYIDDTKKPPVGQGLNKPAEVTLLNIRCFDKKTNTQ
ICEGPKFEKYKEMLKKKAEEQGAEFLSYDPAKTEWKFRVYHFSKYALIDDDQWDLD
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaagtagtccatttgggcagtcatctagttcaccatttggatcacagtca
gtgttcgggcaaaccaatgtaacgaataattctctcactccacaaccttttggtcaatct
tcatcatcaatttcttcaacacctgcttttggggctgcttcatcaccaggatttgggact
tcaacacctgcttttgggagtggtggaaaatctgcatttgggcagaactcgcttggaggt
tttggatcagccactcagactagtccttttggaagctcaactcagcagtctcagcctgca
tttggcagtaatttgtttggttcaactgcgccatttggcgctcaaagccaaccttcattt
ggtggaaccaacactccggcttttggttcttcacccagtccatcttttggaagtagtgga
actgcctttggggttggaggcactcctgcgtttgggtctgcaggagcatttggatccaca
aacacctctgtatttccggctggtggtgctcctgcttttggaactacaactacctccgga
tttggtggcacatccacctccccttttggggccgctagcgcttctgcttttggtcaatcc
aacagtcaagcttttggtgctagtgggggagcgccagcatttggctcaaccactccatct
tttagtttcaattcaagtccagcacttggccaatcgacaccgccttttggatctgcacca
caaccttttggtacacagggttcttcgggagcgcaagcgataacaccaactttcgggagt
agtggttttgggcagccagttcagggaggaagtagagtaacaccttatcgggcaactgag
gacacagatgggactagtaaccaaccacagggaaagttggtatctatatcagccatgcaa
gcatacaaggataaaaaccatgaagagctgaggtgggaagattaccagcggagtgataaa
ggtggacctaattctgctggtcaaactacttcactgagctctggtgtgcctggagcagca
tccaacccttttggctccgcagcatccaacccttttggctcctcacaaacattcggacag
tctgctgggagcccattttcaatgtctgcgccgcctacgcaaacaaacttatttaccccc
acgcccgctccatttggtggcacaggtcttgcaacaactaccgcaacattcggttcttca
ccatttggttctgctcctactacaacaccctctctatttgggtcaaatccagcacaatca
tcgtcccctttcgggacatcgacatccgcgtttgcctccagtccttctatatttggtaca
gcaagctcaactgcaactggatcttcatctctatttggtccttcaccaggtcaaggacag
tccccagtgggtacttcagcttttggaagtcaatcatcgcctctttttcagtcatcatca
ccttcactggggataggatctggtttgggccaaactagctccatctttccgcagactgga
aacttttccaatgcttttaatactacttcaaacagtttcggtacaagtgggtttcaaaac
tcatcactcactacaggcgggcagttgggcttcagccaaagcactccttctctatcctct
tttcagccgagtcttgcttcacagacaaacagtggtttcaacctcagtaatgccggccag
actcaagcaggcggtgcaccaagcatttttggacagaatcttggacaattaagcaatcag
agctcggcagttctacaaccggttgctattaccaatccttttggcacccttccagcaaca
cctcatatatctattgggaatagtgggacctcaccgtcaattcaatatggaatttctagc
atgcctgttgtcgacaaaccttcccctgttagagtatcatccttattaacaccacggcac
ttgtctcagaggcgtatcaggctaccagctagaaaatatcatcccaaaaatgatggttca
agggtagcttttttcaatgaagacgacgaagcacccagcactccgaaggcagatgctctt
tttattccaagggaaaatccaagagccttgactattcggccagttgatcactggccaaag
ccttcaaaaaaagaagcttctgtcctcgtgtttgaaaacggtaaatcatcctcggagaat
cagcattccgttaatggatctgttgctgaagaaaacaatagcattgccaatggaaatgga
ttcatcaagcaccaaagtaattctgtcaaaatcagcgagaaacccaatggtcgctgtgat
aataaaacaaaccaacaaggagattcctatattacccgttcaggcaacagaggggacgat
gctgctattatatatgaacatggggccgatgtagaggcgaccatgccaaaacttcgacat
gcagaatattatacagagcctcaaatccaggagctggctgccaaagaacggttaaaacct
ggatactgcaggcatgtgaaagacttcgttgtaggacgacaaggttatggaagcattaag
ttcctcggagaaaccgatgttcggaggcttgacctggagtcaatcgtccagtttaatgac
cgggaagttattgtctacattgacgacaccaagaaaccgcctgttggtcaaggtcttaac
aagcctgctgaagtcactcttctcaacatcaggtgcttcgacaaaaagactaatacccag
atctgtgaaggacccaaatttgaaaaatacaaggagatgctaaagaagaaggcagaggag
caaggtgctgaatttttgtcatatgaccctgctaaaactgagtggaaatttagagtgtac
catttcagcaaatacgcgctcattgacgatgatcaatgggatctcgactaa
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