Silene latifolia (white campion): 141656573
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Entry
141656573 CDS
T11116
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141656573
03036 Chromosome and associated proteins [BR:
slaf03036
]
141656573
Enzymes [BR:
slaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141656573
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
141656573
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141656573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
CMS1
ResIII
DUF4766
BSP_II
Motif
Other DBs
NCBI-GeneID:
141656573
NCBI-ProteinID:
XP_074319623
LinkDB
All DBs
Position
5:7097792..7103100
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AA seq
712 aa
AA seq
DB search
MPSLPISDSMVSETLISPKSNKKSKISDDVVETLKTLDSADLKKKSKKDKKGSSEKSSEK
KDKDKKKKKRKVEELEEEEEGNGSDSTNSEIVEPNGNNGNGNLMNKKVKFMDVDDEEEEE
VEEEEDDPNSLEKFRISKPLKDALISKGIKALFPIQAMTFNAVLDGADLVGRARTGQGKT
LAFVLPILESLVNGCTKARRRSGYGKSPSVLVLLPTRELATQVFADFQLYGGAVGLQACC
VYGGAPMHSQINSLKRGVDIVIGTPGRVKDLLEREVLNLGSLLFRVLDEADEMLKMGFVD
DVELILGKVDDVKKVQTLLFSATLPAWVKQLSTKFLKSDKKTVDLVSDQKMKASTSVRHI
AMPCSASARPELIPDIIRCYSSGGRTIIFTETKESASQLASSLPGARALHGDIQQSQREV
TLSGFRSGKFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV
LLFDPKKSGVNKIERESGVKFEHLPAPQPADVAQAAGVEAATSILQISDSVIPAFKKSAE
ELLSTSGLSAVDLLAKALAKAAGYKDIKERSLLTGMEGFVTVHLEAGRPIYTPTFAFGML
RKVLPEDKVESVQGLGITADQTGAVFDVPVNDLETFLVAGRKNADQMSLEVVKTLPRLQE
REPRGRFGNNRGGGGGGFSRGGGGGGRFGRGGGGFSRGGGGGGFRNNGYNRR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattacctatctccgattcaatggtctcagaaaccctaatttcccccaaatcc
aacaaaaaatccaagatttccgatgatgttgttgaaacccttaaaaccctagattccgcc
gatcttaagaagaaatcgaaaaaggacaaaaagggttcttcagagaagtcttcagagaag
aaggataaggataagaagaagaagaagcgtaaagttgaggaattggaggaagaagaagag
ggaaatgggagtgattccacaaattcggagattgttgaaccgaatgggaataatggtaat
gggaatttgatgaataagaaggtaaaattcatggatgttgatgatgaggaggaagaggag
gttgaagaggaagaagatgatccgaattcgcttgagaagtttcggatatcgaaacctttg
aaggatgctttgatttctaaagggattaaagctttgtttcctattcaagctatgaccttt
aatgctgttcttgacggggctgatttagtcggtcgtgctagaactggtcagggcaagaca
cttgcatttgtgctgccaatactcgagtctttggtgaatggatgcactaaagccaggagg
aggagtggctatgggaagtcaccaagtgttttggtacttttacctaccagagagttagca
actcaggtatttgccgactttcaactttatgggggtgctgtgggccttcaagcgtgttgt
gtgtacggtggagcacccatgcattctcagattaacagcttaaaaagaggcgttgacatt
gtaattggaacacctggtcgtgtaaaggatctattagagagggaggttcttaacttgggc
tctttactctttcgagttctcgatgaagctgatgaaatgctgaaaatgggatttgttgat
gatgttgaactaattttaggaaaggtggacgacgttaagaaggttcagacattactgttt
agtgcaaccttgcctgcttgggtgaagcagctctccaccaagtttctaaaatcagacaag
aaaactgtggatcttgtaagtgatcagaaaatgaaggccagcaccagtgttaggcacatt
gccatgccttgttctgcttctgctaggcctgagctcatccctgacatcatccgctgctat
agtagtggaggacgcacaataatcttcactgagacaaaagaatctgcttcccagcttgcg
tcatcactacctggtgctcgagctttgcacggtgacatacaacagtcacaacgtgaggtc
acactttctgggttcagatctggaaagtttttgacactggttgccacaaatgtagcagca
agaggtctagatatcaatgacgtgcagttgatcatccaatgtgaacctccccgtgatgtt
gaagcctacatccatcgatcaggccggacaggcagagcaggaaatactggagttgctgtg
ttgctttttgatccaaaaaagtccggtgtcaataaaattgagagggaatcaggtgttaag
tttgagcatttaccggcacctcaacccgctgatgttgctcaggcagctggtgtggaagca
gcaacatctatactccaaatttctgatagtgtaattccagctttcaagaagtctgctgag
gaacttttgagtacttctggtctatccgctgttgacctgctagcaaaagcactcgctaag
gctgctggctacaaagacataaaggaaagatcacttctcactggcatggagggttttgtg
actgtacacctcgaggcagggcgaccaatctatacaccaacgtttgcatttggtatgctt
aggaaggttttacccgaggacaaagtagagtctgtgcaggggctagggatcactgcagat
cagactggtgctgtttttgacgttccagtcaatgatttggaaaccttccttgttgctggt
cggaaaaatgctgatcaaatgagtcttgaggtggttaaaaccttgcctcgtttacaagaa
agagagcctagaggaaggttcggtaataatagaggtggtggaggtggtggtttctcccgt
ggtggaggtggtggtggtagatttggaagagggggtggcgggttctctcgaggtggtggt
ggtggcggctttagaaacaatggatacaataggaggtag
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