Silene latifolia (white campion): 141656956
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Entry
141656956 CDS
T11116
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141656956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141656956
Ubiquitin system [BR:
slaf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
141656956
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
141656956
NCBI-ProteinID:
XP_074320153
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Position
5:18755811..18757688
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AA seq
305 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKT
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtcaagaccctaactggcaagaccattactctcgaggttgagagttcc
gacaccattgacaatgtcaaaaccaagattcaggacaaggagggcattcctccagaccag
caaagactgatctttgctgggaagcaactcgaggatggccgcacactcgctgattataac
attcagaaagagtctacccttcaccttgtgcttcgtttgaggggaggcatgcagattttc
gtgaaaaccttgactggaaagaccattactctggaggtcgagagttctgacaccattgac
aatgtcaaaactaagattcaggataaggagggcatccccccagatcagcaaaggcttatc
tttgctggtaagcagctggaggacggccgcaccttggcagattataatatccagaaggag
tctaccctccatcttgtgcttcgtctgaggggagggatgcaaatctttgtcaagactctt
actggcaagaccattactcttgaggtcgagagctccgacactattgacaatgtcaagacc
aagattcaggacaaggagggaatccccccagaccagcaaaggctgatatttgccggaaag
caattggaggatggccgtaccctggctgattacaacatccagaaggagtctaccctccat
ttggtgctccgcttaaggggagggatgcagattttcgtgaagacccttaccggaaagacc
atcaccctggaagttgagagttcggataccattgacaatgttaagacgaaaattcaggac
aaggaagggatcccaccagatcagcagaggttgatctttgcagggaagcagttggaggat
ggccgcaccttggctgactacaatatccaaaaggaatccactctccaccttgtcctccgc
ctccgtggtggtttctga
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