Silene latifolia (white campion): 141657224
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Entry
141657224 CDS
T11116
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141657224
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
141657224
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
141657224
NCBI-ProteinID:
XP_074320481
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Position
5:33799714..33802152
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AA seq
418 aa
AA seq
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MSTSQLVSFFIIFIIVNLPYYCSSCYTKSNYNENGRRILLGVTKSFSVVNYGAKGDGISD
DTRAFEKAWKQVCSSTGSASLLVPSNQNYLLKPLTFSGPCKANVTLKISGNILASNDRSD
YEKDSGKWLVFQGIDNLVVQGAGGSIDGNGKIWWQNSCKINKKLPCKKAPTALTFYKCNH
LMVKDLKIQNAQQMHVSFQKCIHVMASGLTISAPGNSPNTDGIHITNTQNILVTSAVIGT
GDDCISIVNGSRKVRGMNIRCGPGHGISIGSLGDANSEAHVTDVEIKGATLSGTTNGLRI
KTWQGGSGVASNIRFENVEMSNVNNPIIIDQNYCDQAEPCKQQASAVQVRDVVYRNIRGT
TSSNPALIFNCSQTYPCRGIVLQDVIIHNTQTTTTPQASCDNVQLSDLGTVSPQCPSL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcacaacttgtttcatttttcataatctttattattgtcaatctcccttat
tattgttcttcatgttatacaaagagtaattataacgaaaatggtaggagaattcttctt
ggtgtcaccaagtcgtttagtgttgttaattacggagctaaaggagatggaatctctgac
gatactcgggcatttgaaaaggcatggaaacaagtttgttcaagcacaggatcagcttca
ctcttggttccgagcaatcaaaattaccttcttaagccacttacattttccggcccatgc
aaagctaatgtaacattaaagatttctggaaatatattggcatccaatgatcgatcagac
tacgagaaagactcggggaagtggcttgtttttcaaggaattgataaccttgttgttcaa
ggtgctggtggctcaattgatggtaatggaaagatatggtggcaaaactcgtgtaaaatt
aacaagaaactcccttgcaaaaaagccccaacggctttaaccttttacaaatgcaaccat
ttaatggtaaaggacttgaagatccagaatgctcaacaaatgcatgtttcctttcaaaaa
tgcatccatgttatggcttctggtctcacaatcagtgctccaggaaacagtcctaacacc
gatggcattcacattactaacacccaaaacatcctcgttacaagcgcagttataggaaca
ggtgacgattgcatatcaatagtgaatgggtcacgcaaggtgcgaggcatgaacataagg
tgcggaccaggacacggtataagtatcggtagcctgggtgatgcaaattctgaggcccat
gttacagatgtagagatcaaaggagcaactctttctggaactacgaatggacttcgcatt
aagacttggcagggtgggtctggagttgcaagcaacatcagattcgagaatgtagagatg
tcgaatgttaacaacccaatcattattgatcagaattactgtgatcaagctgagccctgc
aaacagcaggcctcggctgttcaagtcagagatgtggtgtaccggaacataagagggacg
acttcttcaaacccagcactgatctttaattgtagccaaacttatccatgtcgagggatt
gttctgcaagacgttatcatacacaatactcaaacaacaacaacccctcaagcgtcttgc
gacaatgttcaattatcggaccttggaactgtctctcctcaatgcccatccctctaa
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