KEGG   Silene latifolia (white campion): 141657224
Entry
141657224         CDS       T11116                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf00040  Pentose and glucuronate interconversions
slaf01100  Metabolic pathways
Module
slaf_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    141657224
Enzymes [BR:slaf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     141657224
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 141657224
NCBI-ProteinID: XP_074320481
LinkDB
Position
5:33799714..33802152
AA seq 418 aa
MSTSQLVSFFIIFIIVNLPYYCSSCYTKSNYNENGRRILLGVTKSFSVVNYGAKGDGISD
DTRAFEKAWKQVCSSTGSASLLVPSNQNYLLKPLTFSGPCKANVTLKISGNILASNDRSD
YEKDSGKWLVFQGIDNLVVQGAGGSIDGNGKIWWQNSCKINKKLPCKKAPTALTFYKCNH
LMVKDLKIQNAQQMHVSFQKCIHVMASGLTISAPGNSPNTDGIHITNTQNILVTSAVIGT
GDDCISIVNGSRKVRGMNIRCGPGHGISIGSLGDANSEAHVTDVEIKGATLSGTTNGLRI
KTWQGGSGVASNIRFENVEMSNVNNPIIIDQNYCDQAEPCKQQASAVQVRDVVYRNIRGT
TSSNPALIFNCSQTYPCRGIVLQDVIIHNTQTTTTPQASCDNVQLSDLGTVSPQCPSL
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcgacctcacaacttgtttcatttttcataatctttattattgtcaatctcccttat
tattgttcttcatgttatacaaagagtaattataacgaaaatggtaggagaattcttctt
ggtgtcaccaagtcgtttagtgttgttaattacggagctaaaggagatggaatctctgac
gatactcgggcatttgaaaaggcatggaaacaagtttgttcaagcacaggatcagcttca
ctcttggttccgagcaatcaaaattaccttcttaagccacttacattttccggcccatgc
aaagctaatgtaacattaaagatttctggaaatatattggcatccaatgatcgatcagac
tacgagaaagactcggggaagtggcttgtttttcaaggaattgataaccttgttgttcaa
ggtgctggtggctcaattgatggtaatggaaagatatggtggcaaaactcgtgtaaaatt
aacaagaaactcccttgcaaaaaagccccaacggctttaaccttttacaaatgcaaccat
ttaatggtaaaggacttgaagatccagaatgctcaacaaatgcatgtttcctttcaaaaa
tgcatccatgttatggcttctggtctcacaatcagtgctccaggaaacagtcctaacacc
gatggcattcacattactaacacccaaaacatcctcgttacaagcgcagttataggaaca
ggtgacgattgcatatcaatagtgaatgggtcacgcaaggtgcgaggcatgaacataagg
tgcggaccaggacacggtataagtatcggtagcctgggtgatgcaaattctgaggcccat
gttacagatgtagagatcaaaggagcaactctttctggaactacgaatggacttcgcatt
aagacttggcagggtgggtctggagttgcaagcaacatcagattcgagaatgtagagatg
tcgaatgttaacaacccaatcattattgatcagaattactgtgatcaagctgagccctgc
aaacagcaggcctcggctgttcaagtcagagatgtggtgtaccggaacataagagggacg
acttcttcaaacccagcactgatctttaattgtagccaaacttatccatgtcgagggatt
gttctgcaagacgttatcatacacaatactcaaacaacaacaacccctcaagcgtcttgc
gacaatgttcaattatcggaccttggaactgtctctcctcaatgcccatccctctaa

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