Silene latifolia (white campion): 141657269
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Entry
141657269 CDS
T11116
Name
(RefSeq) nuclear poly(A) polymerase 1-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141657269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141657269
Enzymes [BR:
slaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
141657269
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
141657269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_central
PAP_NTPase
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
HNF-1B_C
Motif
Other DBs
NCBI-GeneID:
141657269
NCBI-ProteinID:
XP_074320538
LinkDB
All DBs
Position
5:37314070..37323028
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AA seq
738 aa
AA seq
DB search
MASYGANGLRPNGQRLGITEPISLGGPTEDDVIKTRHLEKYLENVGLYESQEEAVKREEV
LGRLDQIVKAWVKTISQAKGLNDQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
TREEDFFGELHRMLCRDAELRELRAVPDAHVPVMEFKFNGVSIDLLYAKLSLWVIPEDLD
ISQDSILREYDERSVVLMVASYDQILRLVPNINNFRTTLRCMRFWAKRRGVYSNVAGFLG
GINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCDIEEGSFGLPVWDPRRN
PKDRYHLMPIITPAYPCMNSSYNVSSSTLRIMTEQFQRGHEVCEEMEANKADWDTLFEPH
PFFEAYKNYLQIDINAENADDFLNWKGWVESRIRTLTLKIERHTYNMLQCHPHPGEFSDK
SKPFHCSYFMGLQRKKEIPAGEGEQFDIRMTVDEFKQTVNMYTRWKPGMEIRVGHVKRRN
IPAFVFPGSIKPSRPTKSSSESRRLVEGNSSVSAVAEASECKSISDKPDDGKKRKRENDD
IALKCSVSLASSSGGGRNGSPVSTATSLMKLNHVDTNAFVEPGKAAVDTDMINLEISELN
GSSQISSLKTLPAPAVPSNFNVAESLAIEKIMSGPYGANKEPVPELDELEDNLGKANQVE
FFENSTEPSDEPAKSSSVVAIMNGSTAAPSTSFATEDLEELEPSELAMPAPAPINPAAAQ
KKPLIRLSFTSLGKATSR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctagctatggagcgaatggtcttcggcctaatggacagaggttgggtataacagaa
cccatttcgttgggtgggccaacggaggatgatgtgatcaaaactcgccatcttgaaaag
tacttggaaaatgtggggctgtacgagagtcaggaggaagcagtcaaaagggaggaagtg
cttggaagactagaccagatagtcaaggcttgggtgaaaacaataagtcaagccaagggg
ttgaatgatcaattggttcaggaagcaaatgccaagatcttcacttttgggtcgtaccgg
cttggggtgcatggccctggagctgatatagatacactttgtgtcgggcctagacatgca
acacgagaggaggatttctttggtgagctccataggatgctttgtcgagatgccgagtta
cgagaactgcgtgctgtccctgatgctcatgttccagtgatggagttcaagtttaatggg
gtctctattgatcttctgtatgcaaagttgtcgctttgggtgattcctgaagatttggat
atctcgcaagattcaattttgcgagaatacgatgagcgatccgtagtcttaatggttgcg
agttacgatcaaattttgcgtttggttccaaatataaataacttccgtacaacacttaga
tgcatgagattttgggcaaaacgtcgtggtgtctactcaaatgttgctggatttcttggt
ggtatcaattgggcactactagttggtcgcatttgtcaactgtaccctaatgcattgccc
aatatgttagtatctcgcttctttagggtttatactcaatggaggtggccaaatcctgtt
atgctctgtgatattgaggaaggatcgtttggtctgccagtgtgggaccctaggaggaat
cccaaggacagatatcatttgatgcccattataactcctgcgtacccgtgcatgaattct
agctataatgtctcgtccagtactttaaggattatgacggaacagtttcaaagggggcat
gaagtttgcgaggaaatggaagccaataaagctgactgggatacactgtttgagcctcat
cccttttttgaagcatataaaaactatctgcagatagacatcaatgcagagaatgctgat
gactttctaaattggaagggatgggttgagtctcgtattcgtacgcttactttgaagata
gagagacacacatacaacatgcttcagtgccatccacaccccggtgaattctcagataaa
tccaaaccttttcattgcagttatttcatggggttgcaacgtaagaaagagattccagct
ggcgaaggggagcagtttgatataagaatgactgtggatgagtttaaacaaacagtgaat
atgtatactcgctggaaacctgggatggagatccgtgtaggccatgtgaaaaggagaaat
atacctgcttttgtattccctgggagtataaaaccttcccgtcctactaaatcatctagt
gagagtaggcggcttgtagagggcaactcatctgtcagcgctgtggcagaagcatcagaa
tgtaaatccatttctgataaaccagatgatgggaagaagagaaaaagggaaaatgacgat
attgctcttaagtgctctgtatctttggcttcctctagtggtggtggtcgtaatggtagt
cctgtcagcactgcaacgtctctgatgaagttaaatcatgttgatactaatgcatttgtt
gagcccgggaaagctgcagtagatactgatatgataaacctggaaatctctgaactcaat
ggatcttcacagataagttccctgaagactttacctgctcctgcagttccatcaaacttc
aatgtggcagagtcgttggcaatcgagaaaattatgtcaggcccttatggtgccaacaaa
gaacctgttcctgagctagatgagcttgaggataacttgggaaaagcaaatcaagttgag
tttttcgaaaatagcaccgagccgtcagacgagcctgctaagtcatcttcagttgttgca
ataatgaatggctctactgctgctccatccacttcgtttgctaccgaggatttggaggag
cttgagccgtctgaacttgcaatgccagctccggctccaataaatcccgccgctgcgcag
aagaagccacttatcaggcttagctttacgtccttgggtaaagcgacaagtcgatga
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