Silene latifolia (white campion): 141657296
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Entry
141657296 CDS
T11116
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03030
DNA replication
slaf03410
Base excision repair
slaf03420
Nucleotide excision repair
slaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141657296
03410 Base excision repair
141657296
03420 Nucleotide excision repair
141657296
03440 Homologous recombination
141657296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141657296
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141657296
Enzymes [BR:
slaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
141657296
DNA replication proteins [BR:
slaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
141657296
DNA repair and recombination proteins [BR:
slaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
141657296
NER (nucleotide excision repair)
GGR (global genome repair) factors
141657296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
141657296
NCBI-ProteinID:
XP_074320574
LinkDB
All DBs
Position
5:39298856..39310577
Genome browser
AA seq
1083 aa
AA seq
DB search
MCSKSTQHLGRASFRAISMASSFSSSSLKAPFPPLFWASSYPSRCRTRFFCFSSLAREWE
DHLLQQRKCGLSYKDNELWTRSTESRRHYEQPMCSLRQSTTDSTSDFAVNSMPPWRLSRQ
TRYEEPGRPKVVTGSEKSLWRQNTEEVKNSKLHFSQSVVEVQRAPSKVTQKPSMDSLHES
INEESRSLGISSVPGPRHISTADLTIEPDCSPVEAHERLNADATKRGLNSNGVLMEKVNG
TLLTQDKDTAHQKSVTADYSPFLGDEVIDLSANGLPFSEECDDYTISREVDVDNQSKLRW
RLCSIINKVLIVDNIATARMVVHKLTHEYKHHVHACDTEVSEIDVKQDTPVNHGEIICFS
IYSGKDVDYGNGKSCIWVDVLDGGGKHILAEFAPFFEDPSIKKVWHNYSFDCHVVENYEI
KLSGFHADTMHMARLWDSSRRTEGGYSLEALTSDPRVMNEGKMFQDEDLIGKISMKTIFG
RRKTKKDGSMGKIVSLPSVEELQIEEREPWICYSSLDSMSTLKLYESLKSKLSKMPWVMN
GNCYGNMFHFYENYWRPFGKLLVQMETEGMLVDRAYLSKVEKVAIAEQRIAADRFRNWAS
KYCPDARHMNVGSDTQLRQLFFGGSCNRKDQNEFLPTEKKFKIPNTDNVIEEGKKAPKKF
RDITLYKIGSPLQTELYTASGWPSMSGDALKALAGKVSAEYDFSSEASDLEALDAPQNSR
SKDVDISAYGSAYAAFDGGHEGMEACHAIAALCEMCSIDSLISNFILPLQGSHISGKNGR
IHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIASPGNSLIVADYGQLELRILA
HLADCKSMKEAFVAGGDFHSRTAMNMYPYIREAVEQNEVILEWHPQPGEEKPPVPLLKDA
YGSERRKAKMLNFSIAYGKTPMGLAKDWKVSVQEARETVDLWYRERQEVLRWQKARKKEA
LTHGCVHTLLGRARRFPSVDKCSPLQKGHIERAAINTPVQGSAADVAMCAMMEIERNTRL
KELGWKLLLQVHDEVILEGPSESSVEAKDLVVECMSKPFDGKNILSVELVVDAKCAQNWY
AAK
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcaagagtacccaacacttgggtagagcttcatttcgagctatatctatggct
tcttctttttcttcttcttctttgaaagctccttttcctccccttttctgggcttcttct
tatccttctcgttgccgaacccgatttttttgtttttcttcgcttgctcgtgaatgggag
gaccatttactccaacagcggaagtgtggactttcctataaagataatgaattatggacc
agatccacagaatcaagaaggcactatgaacaacccatgtgttctctgagacaaagtaca
actgactcaactagtgattttgcagtaaattctatgcctccatggagattgtcaaggcaa
acgcgttacgaggagcctggacgaccgaaggtagtcacaggttctgaaaaaagtctttgg
agacaaaatacagaggaagtaaagaatagtaaattgcacttcagccaaagtgtggtggaa
gttcaaagagcaccttctaaggtcacacaaaagccttccatggactctttacacgaaagc
ataaatgaggagtctaggtctcttggcatctcttctgttcctggtcctcgtcatatttcc
acggcagacttgacgattgaaccggattgtagtccggttgaagcacatgaacggctgaat
gcagatgctactaaaaggggtctcaactctaatggtgtcctgatggagaaagtcaatggc
acattgttaacacaagacaaagatactgcgcatcaaaagtcggttactgctgattatagt
ccatttcttggggatgaagtaatagatctatctgctaatggtcttccattttctgaagaa
tgtgatgattatacaatatcccgggaagtagatgttgataaccaatccaaacttcgctgg
cggctttgtagcatcattaataaagttcttatagtagataatattgctactgcaagaatg
gttgttcataaactcacacatgagtacaagcaccatgtacatgcttgtgatacagaggta
tccgagatcgacgtgaaacaggatacacctgttaaccatggtgaaataatctgcttcagt
atttattctggaaaagatgtggactatggaaacgggaaatcttgtatatgggtagacgtg
ttagatggaggtgggaaacatattctggctgaatttgctccattctttgaagacccgtcg
attaaaaaggtttggcacaactacagctttgattgccatgttgtagagaattatgaaatc
aaattatcaggattccatgctgatacaatgcacatggcaaggctgtgggattcctctaga
cgaacagagggtggttactcccttgaggctctaacaagtgatccaagggtcatgaatgag
ggcaagatgttccaggatgaagacttgataggtaaaatatcaatgaaaaccatatttggg
aggagaaagacgaaaaaagatgggtcgatggggaaaattgtgtctcttccttcggtcgag
gagttgcagatagaagaaagggaaccatggatctgttattcttctttagattctatgagt
actttgaaactatatgagagcttaaaatccaagttatcaaaaatgccgtgggtaatgaat
ggtaattgttatggtaatatgttccatttctatgaaaactactggcggccttttggcaaa
cttcttgtgcaaatggaaactgaaggaatgttagtagacagagcatatctttcaaaggtg
gaaaaggtggctattgctgagcaacgaattgctgctgaccgtttccggaattgggcatct
aagtactgcccagatgctaggcatatgaatgtggggagtgatacccagctaaggcaactc
ttttttggtggcagttgcaacaggaaggaccaaaatgagtttcttcctacagagaaaaaa
tttaaaattccgaatactgataatgtgattgaagaaggaaagaaggccccgaaaaaattt
cgcgatattacattgtacaaaattggttctccgttacagactgagttgtacacggcgagt
ggatggccttctatgagtggagatgctctgaaggctcttgctgggaaggtatcagcagaa
tatgatttttctagtgaggcttctgatcttgaagcattggatgctccacaaaactcaaga
agtaaggatgtagatatatctgcttatggatcggcttatgctgcctttgacggaggacat
gagggaatggaggcctgtcatgcgattgctgcgttgtgtgaaatgtgctcgattgactcc
ttgatttcaaatttcatacttcctttgcagggcagtcatatatcagggaagaatgggcgc
attcattgctcgttgaacataaacacagaaactggccggttatctgctagaagaccaaat
ctacagaaccaacctgctttagagaaagatcgatataagattcgccaagctttcattgct
tccccgggaaactcactgatagttgctgattatggacagttggaacttaggattcttgca
caccttgcagactgtaagagtatgaaagaagcatttgtggctggtggtgatttccattct
agaactgcaatgaatatgtatccatatattagggaagcagttgaacaaaatgaagtaatt
ttagagtggcatccacagcccggtgaagaaaagcctcctgtccctttgcttaaggatgct
tatggatctgaaagaaggaaggcgaaaatgctcaatttttcaattgcatatgggaaaact
cccatggggcttgctaaagactggaaggtttctgttcaagaggcaagggaaactgttgat
ctgtggtatagagaacgtcaggaggtgttgagatggcaaaaggcaaggaaaaaagaagcc
ttgacacatggttgtgttcacacgttgctagggagggctcgtcgcttcccctcagtagat
aagtgttcacccttacaaaaaggtcacattgaacgtgctgctatcaacacacccgtgcag
ggaagtgctgctgatgtcgccatgtgtgccatgatggaaatagagagaaatacacgtctg
aaagagcttggatggaaactgcttctccaggttcatgatgaagtgatcttggaaggacct
tcagaatcctcagtagaggccaaggatctagttgtggaatgcatgtcaaaaccattcgat
gggaaaaacattctcagtgttgagctagttgttgatgccaaatgtgcccagaactggtat
gctgccaaataa
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