Silene latifolia (white campion): 141657349
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Entry
141657349 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141657349 isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141657349
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141657349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
TPR_HPS5_insect
HEAT_RRP12_N
CRAL_TRIO
bCoV_SUD_C
GNC1_N
Motif
Other DBs
NCBI-GeneID:
141657349
NCBI-ProteinID:
XP_074320645
LinkDB
All DBs
Position
5:complement(43069741..43088807)
Genome browser
AA seq
2675 aa
AA seq
DB search
MRKPIKSRDGAAGHRTRRFTFKSNAEKIDELNIDVIRSLDTLKPEPSSSSFFLDCLIEWR
ELNTAGDFISFYEEMMPLVQTLPLVFLHKDKLISELLSRLRLDAQLSLEPILRLIAELSR
DLQEDFIPFLSKITASFLSLLEDGADREPEIIEQIFISWSYIIMYLQKCLARDVVYILRV
TVKLRYYPKDCIRQFMAKPVSFLVRNASKKELEKGVAKILCEAARKPSEARISGVSALLW
HVMRGTSSNFHSKAGRLMRLLLKDSILSIGDRFTQGSDTVTEILSTVFQRSCVELDPSEL
KLLWEGIFEKINASVPCKSPLHLCHLLSVLISTVSVDRGTKVWDYKPLLDLVALLVQTFM
VKTTVGKTEGKESEVADKILKLMLCILDGLYSSHILDTFPRVALQWAPAFQLRTLMFPEF
LKELVTKDYALLAFQSNILSGLLNLLEITREGGVYVILKFCESLQVKTGGFNVFEGTSDK
VVSELCRFFRKEIGQWEEFLINMSRGDVSSCLVNKDNLAMLWGIVRCIPYFLSTEGNLLL
VNLVDRLDKLLTTEADSFGGVSKEIWQSFIGATLYSYQAAGIIESDEVEHTSRVLHLAKK
YKSSRQVLSAVAEYLELIYGSVLHTETDVVRTHPQLAGAMVTDALYVFSENLYNPDKGIR
VSTLKILCHYELLNYELRISKHDAVDQMALKDNHAVTQCCNVFKLLLTIEETPISIATSR
KITLVVSRIQTFLSDSRASEVYILPMFYGIIGLLHNQFRDLSNSALDCLSVAMSKNPALL
WDRFIRVFELCLAVFLKTNVLEDTDEGLEIMSVESLKGANDLVELFGSFCDTGSFERSYS
SIFIPLLQALQKIPSVVESHSRQVVPLFLRFMGYRDENPCSVGVFDSHVCSGRDWKLALV
EWLNLLKLMKNSRSFYRSQMLKDVLVNRLLDDNDADVQTKVLDCLLNWKDASLLAYEKHL
KNLANSKFLREELATWSLSKESKLIEEEHRAELIPLVTRLLMPKVRNLRTLASRKHASVH
NRKAVLGFIAQLTVHELPLFFSLLMESLQITKPESEDRANYFGGSGERSMDEFQAYFLDL
FTMENILAIPWKKRYGFLHVVEEILLIFDATQVQPCLRLLMGCVVRLLESCASSLYTKSN
GTQAEDHSLVDLPKSEGNDKSVNFELKQFKDMRSLCLKIIYCGLSKYENYDFGSPFWDLF
FKSVKPLVHAFKHEGSSSEKPSSLFFCFLAMSQSQYLVSLLCRERNLIPDIFSILSVPTA
SEAIVSAVLKFTENLLTLEVEHGMEIDAMRDILISNLEGLIDSLHNLFYNNSEQKRKLLK
HPGEIVLRIFKLLSRFIKDESAAKKFVDILLPLACGGTKNSGVCMEALQILRDLIPLLSY
ESTSKILNGVSPILISARLDLRLSICDLIDALAESDASICSMARLVRDLNATVMGDLDFD
TIISAYEKITADYFYGFPEDQALVILSHCIYDMTSEEIILRQSAYRSLLSFIDFSARIIG
KEMDEGTMESDGNVWTNVCIQRVVNKFLLKHMGIAMIKETTLRKEWIDLLHEMVLKLSGI
STLKSLNVLCSEDAEVDFFNNIVHLQKHRRSRALSRFNNIFATEKLPEFILKSIFLPLFF
NMLFDLPTGKGENIRSACLDAIASVSRQFGWRSYYDLLMRCFREITKKPDREKVLVRLVC
SILDQFHFQETCSTQDMQVNLSDGVVNDDVPATTTSVVQSCLTGAVLPKLQKLLVSDPEK
VNVNVSVAILKVLKLLPGNTIDSHLSSIIHRISNFLKNRLESIRDEARSALVVCLKELGV
EYLKLVVKILMATLKRGFELHVLGYTVNYILSKSLLNSFGSGELDYCLDELLIVVSSDIF
GEVAEQKEVDKIAFKMKETRKQMSFETLKIIAQNVTFQSHHMKLLSPVTAHLQKHLTPKV
KSKLETMLTHIALGVDRNTSVNQTDLFVFMYSLIEDWLSEETRKREIPDADQSDKEKQQN
ESSKTAVKRYIGTDSRCSYLITVFALGLFHNRMRNIKLNRGKDQVLSMLDPFIKLMTSCL
SCKYQEIIAATLKCILPLVRLPLPSLESQADKIKVTLLDIAQSSYDVNSLVTQSCLKLLA
ALLRSTKITLSNEQLHVLIQFPLFIDLEKNPSFVALSLLKAIVRRKLVVAEIYDIVTRVS
ELMVTSQEEAIRRKCSQIFLQFLLNYHLSQKRRDQHLDFLVSGLRYEHASGREAVLDMLK
TIIKRFPDSIINEQSQSLFIHLVLALANDNDKQVRSLIGIVIKLLVSRISPQALDNILNH
CLALYLGEKQKLWSTAAQVLGFAAEVMKKGFHKHINLILPVMKRIMMSSRAAFDDGQLST
SDHEADPFWKETYFSLVLFEKILTVMPDMFFVVDFEDIWTLISEFLIHPHPWICDISSRL
VALYFEQIGKQGKKLGSTDLTSTSRLFWIGASLCWRLTVQLPDKGARKLVKCNLALVICG
IQSLLRQSEFQDPHKFWSVLAPREQQCCLKACHLLGTSIQKSIMESFTCELHEVPELKDN
KDLSYLLVSSLLNTMGKTAVVTEDLQCKMILGSFRLIASKLSSEDCQQYAVSLLLPIYKL
SEGYAGKVVSDDVKTRADKVRQKIQETLGTQNFVQVYTQIRQSLGEKRQKRKRDEKVMAV
INPDQNAKRKMRMSAKHQAHKKRKMIATKMARWMR
NT seq
8028 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcccattaagtcccgcgatggcgctgctggccaccgtacccgccgctttacg
ttcaagtctaacgcggaaaaaattgatgagctgaatatcgatgttattcggagtctcgat
acattgaagcctgagccgtcgtcttcatcgttttttttagactgtttgatcgaatggaga
gaattaaatacagctggagacttcatatcattctatgaggaaatgatgcctcttgtccaa
accttaccattggtgtttttacacaaagacaagctaatttctgaactactttctaggttg
cgattagatgcacaactttccttggagccgattctcaggttaattgcagagttatcaaga
gatctacaggaggactttataccctttctttcgaagatcacggcttcatttttatcgctg
cttgaagatggtgctgaccgagaaccagaaattatcgagcagatctttatctcatggtca
tatataattatgtaccttcaaaaatgtcttgctcgagatgttgtctacattctcagggtt
acagtcaaattaaggtactatccaaaagattgtatccggcagtttatggccaaacctgtg
tcttttctggtgaggaatgcatccaagaaagaactcgaaaaaggcgtagctaaaatttta
tgtgaggctgcaagaaaaccttctgaggccagaatatccggagttagtgctctgctgtgg
catgttatgagaggaacatcttccaattttcactcaaaggcaggtcgattaatgcgatta
ctacttaaagactcaattttaagtattggtgacaggttcacccaaggatctgacactgtt
actgaaattttgagtactgtctttcaaagatcatgcgtggagttggatcccagtgaacta
aagctcttgtgggaaggcatatttgaaaaaattaatgcttctgtaccgtgtaaatcacct
ttacatttatgtcatctgctatcagtccttatatcaaccgtctctgttgatcgtggtaca
aaagtctgggattacaagcctttgctggatcttgttgctttgttagtgcagacatttatg
gtgaaaaccactgttggtaagactgaggggaaagaatctgaagttgctgataaaattctc
aagctcatgctgtgcattcttgacggcctttacagtagccacatcttggatactttcccc
cgggtagccttacagtgggctccggcatttcaattgaggaccttaatgtttccagaattt
ctgaaagagttggttaccaaggactatgctttgcttgcatttcaaagtaatattctaagt
ggtttgttgaacctgctggagataacgagggaaggaggggtgtatgtgatactgaaattc
tgtgagagtcttcaagttaaaacgggaggcttcaatgtctttgaaggaacatcagataaa
gtagtgtcagagctctgccgtttctttaggaaggaaattggtcaatgggaggaattttta
attaatatgtcacgtggggatgtgtcaagttgtttagtaaacaaggacaatctggctatg
ttatggggaattgttcgctgcattccatatttcttatctactgaaggcaatcttttgttg
gtgaatttggttgatagacttgataaacttttgacaactgaagcagattcttttggaggt
gtttcaaaagaaatttggcagagctttatcggtgcaactttatatagctatcaggctgca
ggaataattgaaagtgacgaagtcgaacatacaagcagggttttgcatctggcaaagaaa
tacaaatcatctcgccaagttctgtccgctgttgctgagtatcttgagttaatttatggg
tctgtgctccacacagagaccgatgttgtaaggacacatccacagcttgctggagcgatg
gtaacagatgctttgtatgtattttccgagaacctttataatcctgataaaggaattcgt
gtttccacccttaaaatattgtgccactatgagctgcttaattatgagctaaggatatca
aagcatgatgctgtggatcagatggctttgaaggacaaccatgccgtcactcagtgttgc
aatgtatttaagctgctcctcacaattgaggaaacacccatctccattgccaccagcagg
aaaataactcttgtagtttccagaatacagacatttttatctgattcccgagcatctgaa
gtttatatcctgcccatgttttatggcattatagggctcctgcataaccagttcagggat
ctgtcaaattcagcattggattgcttgtctgttgcaatgagcaaaaatcctgcgcttctt
tgggataggtttattagggtttttgagttatgcttggctgtctttcttaagactaacgtg
ttagaggatacagatgaaggcttagagattatgagtgtggaatctttaaaaggggcaaat
gatctggtggaactttttggttcattctgcgatacaggttcttttgaacggtcctactca
tcaatatttattccgctacttcaagctctacagaagattccaagtgtcgttgagtctcat
tctcgtcaagtggtgccactgtttttgagatttatgggttacagagatgaaaatccctgt
agtgtgggagtatttgattcgcacgtttgtagtggaagagattggaagcttgcccttgtg
gaatggctaaacctgctgaaattaatgaaaaattcgagatctttttaccgtagccaaatg
ttaaaggacgttttggtaaataggcttcttgatgataatgatgccgatgttcaaacgaag
gttttggattgcctgttaaattggaaggatgcgtctttacttgcttacgagaagcatctt
aagaatcttgccaattcaaagtttctaagagaagaacttgctacctggagtttatctaaa
gagtctaaattaatagaagaagagcacagagcagagcttattcctctggttacgcgattg
cttatgccgaaagttaggaacctgagaacacttgcgtccagaaagcatgctagtgtccat
aaccgaaaggcagttttgggattcattgcccaacttactgtgcacgagcttcctcttttc
ttttcattgttgatggagtccttacagataacgaaacctgaaagtgaggatcgggcaaat
tattttgggggttcgggagagagaagtatggatgaattccaggcatatttcttggacctt
tttaccatggagaacatattggccattccttggaagaagagatatggatttctacatgtg
gtcgaagaaattcttttgatttttgacgcaacacaggttcagccatgccttagattgcta
atgggctgtgttgtccggttgctggaaagttgtgcttcaagtctttacaccaaaagtaat
ggcactcaagctgaggaccattctttagttgatctgcctaaatctgaagggaacgacaaa
tcggttaatttcgagttgaagcagtttaaggatatgagatccctgtgcttgaagataatc
tattgtggtttgagcaagtatgagaattatgattttggttctccattctgggatctattc
ttcaagtcggtaaagcctttagtgcatgctttcaagcatgagggatcaagtagcgagaag
ccaagctccttgttcttttgctttcttgcaatgagccagagtcagtatcttgtatctctt
ttatgtagagagaggaacctgattccagacatattttcaattctgtctgttccaacggct
tctgaagctatagtgtctgcggtactcaagtttacagaaaatcttttgactctcgaagtt
gagcatgggatggagatagatgccatgagggacattttaatttcaaaccttgagggtctt
attgacagcttgcacaatcttttctacaataactctgagcaaaagaggaagcttctcaaa
catcctggtgaaattgtattgagaatttttaagttgctatccaggtttataaaggatgaa
tcagcagcaaagaaatttgttgacatcctgcttccacttgcttgtggtggaactaaaaac
tccggtgtatgtatggaggccttgcagattcttcgagatctaattccattgctaagctat
gaaagtactagcaaaatcttgaatggtgtttctcctattctgatttctgctagactggac
ttgcgcttgtccatatgtgatctaattgatgcccttgctgagagtgatgcatccatatgt
tctatggctagacttgttcgtgatttgaatgcaactgtgatgggagaccttgattttgac
actatcattagtgcttatgagaagattactgcagactacttctatggttttccagaggat
caggcattagtgattctttcacactgcatttatgacatgacgtctgaagaaataattcta
aggcaaagcgcatataggtcacttctctcttttattgatttttcggctcggataattggg
aaagaaatggatgagggtactatggagtctgatggcaatgtgtggactaatgtttgcatt
cagcgtgttgtaaataaatttcttttgaagcatatgggaatcgcaatgataaaagaaacg
acactaagaaaggaatggattgatttgctgcatgagatggttctgaagctttcaggaatt
tcaactcttaagagtttgaatgtgctttgtagtgaagatgctgaagtggacttcttcaac
aatattgtgcatctccagaaacataggagatcaagagccttgtcacgcttcaataatatt
tttgccactgagaagcttccggagtttatcctgaagagtatattccttccacttttcttc
aacatgttatttgatctgcctacggggaagggagaaaatataagaagtgcgtgcctggat
gctattgcatctgtttctcgtcaatttggatggagatcgtactatgatttattgatgagg
tgtttcagggaaataacaaagaaacctgaccgggaaaaggtcctggtccgacttgtttgt
tccattcttgaccagtttcatttccaagagacttgttctacacaagacatgcaagttaat
ttaagtgatggggtagtgaatgatgatgtaccggctactactacttctgtagtacaatct
tgccttactggggctgttttgccgaagctgcaaaaactgctcgtgtcagacccagagaaa
gtcaatgtcaatgtcagtgtcgcaatattaaaagttcttaagcttcttcctggcaacacc
atagattctcatctttcaagtattatccatcgtatttctaattttctgaaaaatcggttg
gaaagcattcgtgatgaggctagatctgctttagttgtgtgcttgaaggagcttggtgtt
gagtatctaaaacttgtagtcaaaattttgatggcaacgctaaaacgtgggtttgagctt
catgtcctgggatatacagtaaattatattttgtcaaaaagtcttctgaattcattcggc
agcggggaactagattattgtctagatgaactccttattgttgtaagtagcgacattttt
ggagaggtagctgagcaaaaggaggtggataaaattgcttttaaaatgaaagaaactaga
aaacaaatgtctttcgagacactgaagattattgcacaaaatgtaacattccagtcccat
catatgaaacttctttcaccagtaactgcccatctgcagaagcatttgacaccaaaagtg
aagtcaaagttagagacaatgttaactcatattgcccttggtgttgatagaaacacgtct
gtcaatcagactgatctctttgtcttcatgtatagcctgattgaggattggctgagtgaa
gagacacgtaaaagggagattccagatgccgatcagtcagataaggaaaagcaacaaaac
gaaagcagtaaaacggcggtgaaacgttatattggaacagattcacggtgttcatatctt
attacagtgtttgctcttgggctctttcacaatcgcatgagaaacatcaagttaaataga
ggcaaggatcaagttctctcgatgttggatccattcatcaagctgatgacgtcttgcttg
agctgcaagtatcaagagataatagcagctacccttaagtgcatccttccactagtaaga
cttcctctaccatctttggagtcgcaggccgacaagataaaagtgacactgttggacatc
gctcaaagttcctatgatgtaaatagtcttgtcacacaatcctgtctcaagttgttagca
gcactcctgcgtagcaccaaaataactctgtccaacgaacaattgcatgtattgatccag
tttcctctttttatcgatcttgaaaaaaatccctcctttgttgctctttcacttttgaag
gctattgttcgacgaaagttggttgtagctgaaatatatgatatagtaactcgagtctcg
gaacttatggtgactagtcaagaagaagccattcgcagaaaatgtagtcaaatatttctg
caattcttgcttaactatcatctgtctcagaaacgcagggatcaacaccttgattttctt
gtttctggtctaagatatgaacatgcttctggaagagaggctgtactagatatgctaaag
acaattataaagaggtttccagatagcattataaatgagcagtctcagtcattgtttatc
catttggtgcttgctttggcaaatgataatgataaacaagttcgttccttgattggaata
gtcataaagcttcttgtcagcagaatcagcccacaggcgcttgataacattctaaatcac
tgtcttgctttgtatctgggagagaaacaaaaattgtggagcacagctgcccaggtcctt
gggtttgcagccgaagtgatgaaaaagggatttcacaaacacataaacttaatcctgcct
gttatgaaaaggattatgatgtcttctagagctgcctttgatgacgggcagttaagtacc
tctgaccacgaagcagatcctttctggaaggagacgtatttctcactagttttgttcgaa
aagattcttaccgtgatgccagacatgttctttgtggtagattttgaggatatatggaca
ttaatctctgagttcctaattcatccacacccttggatctgtgatatctccagccgtctg
gtggcattatactttgagcagattgggaaacagggaaagaagctaggttcgactgatctt
acaagcacaagtaggctcttctggataggtgcttctctttgttggcggttgacggttcaa
cttcctgataaaggtgctaggaaacttgtgaagtgcaaccttgcacttgtgatttgcgga
atacaatctctactgcggcaatcagaattccaggatccccataaattttggtcagtcctt
gctcctcgtgagcaacaatgttgtcttaaagcttgtcatttgcttggtacaagtatccaa
aagagtattatggagtcctttacttgtgagttacatgaagttcctgagctaaaagacaat
aaggaccttagctatttgcttgtctctagcctgctcaacacaatgggaaaaaccgccgta
gtaacagaagatttacagtgcaagatgattcttggcagtttcagattaattgcttcaaag
ttgagttctgaagattgccagcagtatgctgtttctttgctgctgcctatctataaactt
tctgagggatacgctggaaaagtagtttcagatgatgtgaaaacccgcgccgataaagtc
cgtcaaaaaatacaagaaacacttgggacccagaactttgtacaagtttacacccaaata
aggcaaagcctaggagagaaaagacaaaagaggaaacgtgacgagaaggtcatggctgtg
attaatccagatcaaaatgccaagagaaagatgcggatgtctgctaaacatcaagcccac
aaaaagcggaaaatgattgcaaccaaaatggcgaggtggatgcggtaa
DBGET
integrated database retrieval system
