Silene latifolia (white campion): 141657414
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Entry
141657414 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141657414
KO
K20222
importin-5
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141657414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141657414
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
141657414
Pre-60S particles
141657414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
HEAT
HEAT_GCN1
Importin_rep_4
TPR_IMB1
Importin_rep_6
TOR1L1_N
HEAT_2
HEAT_EF3_N
IFRD
Vac14_Fab1_bd
MMS19_C
HEAT_MROH2B_C
VPS15-like_hel
Cnd1
TPR_DNAAF5
Arm
TPR_CAND1
Adaptin_N
INTS7_N
DUF577
Ltn1_1st
Htt_N-HEAT_1
ARM_ECM29_C
HEAT_Maestro
HEAT_IPO9_c
ARM_TBCD_2nd
TPR_TNPO3_IPO13_3rd
ARM_ARMC5
IBN_N
ARM_PUB
Phasin_2
Motif
Other DBs
NCBI-GeneID:
141657414
NCBI-ProteinID:
XP_074320753
LinkDB
All DBs
Position
5:complement(54768295..54779874)
Genome browser
AA seq
1116 aa
AA seq
DB search
MASELTHQHHAQMAAILGPDPTHFETLISHLMSTNNEQRSTAESLYNLCKQHQPDSLSLQ
LARMTQSSPHPEARAMSAILLRKLLTRDDSYIYPKLAAATQSSLKSILLSCIQSEDTKTI
SRKLCDTVSELAATIVPENQWPELLPFMFQCVTSDNPKLREMALLIFAQLSQYIGDTLIP
HLTTLHNVFLQCLSGSSTADVRIAALSATINFIQCLNTSSDRDRFQDLLPPMMQTLTEAL
NSGQEATAQEALELLIDLAGTEPRFLRRQLVDVVGAMLQIAEAEALEEGTRHLAIEFVIT
LAEARERAPGMMRKLPQFIQRLFGILMKLLLDVEDDPVWHSAVSEDEDAGETSNYSVAQE
CLDRLAISLGGNTIVPVASELLPIFLAAPEWQKHHAALICLAQIAEGCAKVMIKNLEQVV
SMVLNSFKDPHPRVRWAAINAIGQLSTDLGPDLQTQYHHLVVPALASAMDDFQNPRVQAH
AASAVLNFSENCTPEILTPYLDGIVSKLLVLLQNGKPMVQEGALTALASVADSSQELFQK
YYDVVMPYLKAILVNATDKANRMLRAKSMECISLVGMAVGKEKFREDAKQVMEVLMQLQG
SQMEADDPTTSYMLQAWARLCKCLGQDFLPYMNVVMPPLLHSAQLKPDVTITSADSDVDI
DESDDESIETITVGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAGILVPL
LKFYFHEEVRKAAVSAMPELLRSAKLAIEKGLGQGRNEAYLKQLSDYIVPPLVEALNKEP
EVEICSSMLDALKECIQVVGPLLDENQVRSIVNEIKHTITASSLRKADRAERAKAEDFDA
EEGELLSEENEQEEELFDQVGDCLGTLIKTFKASFLPFFDELSSYLTPMWGKDKTAEERR
IAICIFDDVVEHCRESALRYYDTFLPFLLEACNDENPDVRQAAVYGLGVCAELGGAVFKP
LVGESLSRLDAVLSHPNASHPDNVMAYDNAVSALGKVCQFHRDSIDAAQIVPMWLNYLPI
KGDLIEAKVVHEQLCSMVERSDGDLLGPNNHYLPKIVAVFAEVLCAGKDLATEQTVSRMI
NLLRQLQQTLPPATLASTWSSLQPQQQLALQSILSQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgagttgactcaccaacatcacgctcaaatggcagcgattctcggtcccgat
cctactcacttcgagaccttaatctctcacctcatgtccaccaacaacgaacagcgttcc
accgccgagtcactctacaacctctgcaaacaacatcaacccgactcgctctctctccaa
ctcgctcgtatgactcagtcctctcctcatcccgaggcccgcgctatgtccgctattctc
ctccgaaaactcctcactcgtgacgactcgtacatctaccctaaactcgctgccgccact
cagtcctcgcttaaatctatcttgctgtcgtgtattcaatcggaggatactaagacgatt
tcgcggaagttgtgcgacaccgtttcggaacttgctgcgacgattgtgccggaaaatcaa
tggccggaattgttaccgtttatgttccagtgtgttacttcggataatcccaaacttcga
gagatggcgctgttgattttcgcgcaattgtcgcagtacatcggcgacaccctaattccg
cacctcacaactctgcataacgtgtttttgcagtgtttatccggaagtagtaccgccgat
gttcgaattgcggcgttaagcgccacgattaactttattcagtgtttaaacacgtcttcc
gaccgcgataggttccaggatttgctccctccgatgatgcagaccctaaccgaagcgcta
aattctggccaggaggcgaccgcacaagaagcgttggagttgttgatcgatttggcaggg
acagagccgagattcttgcgtagacagctggtggatgtggttggtgcaatgctgcagatt
gctgaggctgaggcgttggaggaagggacacgacatttggcgattgagttcgtgattacc
ctggcggaggcaagggagcgggctccaggaatgatgagaaagttgccgcagtttattcag
aggttgtttggcatattgatgaaattgttgcttgatgttgaggatgatcctgtatggcat
agtgcagttagtgaggatgaggatgctggtgagacgagtaattatagtgttgctcaggag
tgtttggataggctagcaatttcgttgggcggtaatactattgtgcctgttgcatccgag
cttttgcccattttcttggctgctcctgagtggcagaagcaccatgctgcactcatttgt
ttggctcaaatagccgagggttgcgccaaggtgatgataaagaacttggagcaagtggtg
tctatggtcttgaattcattcaaagatcctcatccacgtgtacggtgggctgctatcaac
gcgattggccaattgtccacagatttgggtccagatttgcagacacagtaccaccatctt
gtcgtacctgcattagcctcagctatggatgattttcaaaatcctcgtgtgcaggcacat
gctgcttcagcagtattgaacttcagtgaaaattgtactccagagatattgacgccttac
ctagatggtatagtgagcaaattgcttgtcctcctgcagaatggaaagccaatggtacaa
gaaggtgctttaactgctttagcatcagttgcggattcatcacaggagctttttcagaag
tattatgatgttgttatgccgtacttaaaagctatactagtgaatgctaccgacaaggcg
aatcgcatgcttcgtgcaaagtccatggaatgtattagcctggttggaatggccgttgga
aaagaaaagtttagggaggatgctaagcaggtcatggaagttcttatgcagttgcaagga
tcacagatggaagcagatgatccaaccactagttatatgctccaggcatgggcaagactc
tgcaaatgcttagggcaggattttttgccatacatgaatgttgttatgccacccttgctt
cactctgctcaactcaagcctgatgtgacgattacaagtgcagattcagatgttgatatt
gacgaatctgatgatgagtccattgaaactatcactgttggggacaaaaggattggaatc
aaaacgagcgttctagaggagaaagctacagcttgtaacatgttatgttgctacgctgat
gagctgaaagaaggtttctttccatggatagaccaggtcgctggtatattggttccacta
ctaaaattttatttccatgaagaagtcagaaaggcggcagtttcagccatgccggagctt
ctgcgttctgcaaaattagctattgagaaggggctaggacaaggtcgcaatgaggcatac
cttaagcagttgtctgactatattgtacctcctttggtggaggctttaaacaaggaacct
gaagtagaaatttgttcaagcatgctggatgctttgaaggagtgtatacaggttgttgga
ccactcttggatgaaaatcaagtgagaagtatagtgaacgagataaagcacactatcaca
gcaagctcattgagaaaggccgatagagcagagagggccaaagcagaggattttgatgca
gaagaaggtgaattacttagtgaggaaaatgagcaagaagaagagcttttcgaccaggtt
ggtgattgtttgggcacattgatcaaaacattcaaggcatcattcttgcccttttttgat
gaactctcttcgtacctgacacccatgtggggcaaggataaaacagcagaagaaagaagg
attgctatttgtatatttgatgatgttgtggagcattgtcgcgaatcagccctcagatac
tatgatacgttccttcctttccttttggaagcctgcaacgatgaaaatcctgatgttcga
caggcagctgtttatggtctcggcgtttgtgcggagcttggtggagctgtattcaagcct
cttgttggagagagcctttcaagattagatgctgtattaagtcacccaaacgcttcacat
cctgacaacgtgatggcatatgacaatgctgtttctgctcttggcaaagtttgccaattc
catcgtgatagcatcgatgctgctcagattgttcccatgtggctcaattacttaccgatt
aaaggcgatctaattgaagccaaggttgtgcatgaacaactttgttccatggtcgagagg
tcagatggggatctgttggggccaaataaccattatctgcctaaaatagtagcagtcttt
gctgaggtcctatgtgctggcaaagatctggcaacagagcaaacagtgagccggatgatt
aatttattaaggcagcttcaacaaactctaccaccggccacccttgcctcaacttggtca
tcacttcaacctcagcagcaacttgccctccagtccatcctctctcagtaa
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