Silene latifolia (white campion): 141657479
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Entry
141657479 CDS
T11116
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141657479
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slaf04812
]
141657479
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
141657479
Microtubules and associated factors
gamma-tubulin ring complex
141657479
Cytoskeleton proteins [BR:
slaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
141657479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
TTRAP
WD40_like
PsbK
Coat_F
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
141657479
NCBI-ProteinID:
XP_074320827
LinkDB
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Position
5:complement(65014657..65023635)
Genome browser
AA seq
782 aa
AA seq
DB search
MALLGAAGGDTVKIFDVSVESGDPCVLNYTPSPGYQVNSLKWNHTNLVVASAGDDKKISL
WRKNGQSMATIPLNSSDSSDNIEEAIQSISFSNKTSRYICSGGTGQVVRIWDLQRKRCIK
WLKGHNASISGTTYNCKDEHLASISVNGNLIVHNLASGARAADFKDPHQQVLRVLDYSQV
SRHLLATAGDDGSVHMWDTTGRTPKVSWLKQHSAPTTGLSFSPSNDKIISSVGLDKKLYT
YDSGTKKSTFCIAYEAPFSSLAFRDDGWILAAGTSNGRVVFYDVRGRPQPFTVLRAYGNS
EAVTSLSWQRSKPTPVNEKNCTAEVALLGGAVEDSVLMPDPLPSVTLSNVSQTATLPGPR
RSSSVESSSFTATMGGYTNSGLSSEETPHRSSLRAGGILPRLHATRSDNFKDDMEVFSPL
VDVQPITPSLDKLWKDPDGSKNDQAGENKTSFLFPNRKFTFPEVGSNTHPIFDWKPSAAA
KQDDNHSTIPGFTADAASRSDDSSSLTPPEAWGGERLSEKLALYRQNGSLPSRFSMLTSA
STSTSMLAGLQDPSPANQSSMNYSTSPSLFSATSRAKDMSSSQEMSLGFSGHVPFSSLSM
NIGSKSGTSQPNLESTGPSSWNLSRKLSTYAERISTSAAYTDGVSASLGSPKIKKTGVET
REELRNSLLSRSDTSSPSEVGLPPSENGALLPHQRMSPADLQQGTSSFTVQLFQHTLSET
LSSFQKSIHEDVRNLHIEILRQSHMQEMELSNFMNSVLDKLDGLTEEVQTLRKENAQLRQ
LL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgttactgggagcagcgggtggcgacacggtgaaaatattcgacgtgtcagtggag
tctggggatccttgcgtactcaactacactccgtcaccgggttaccaagttaactcactt
aagtggaatcacaccaatttggttgttgcgagtgctggtgatgataagaagatcagcctt
tggcgtaaaaatggtcagtctatggccactattcctctcaattcttctgattcttctgac
aacattgaggaggcgatccaatctatcagctttagcaacaagacttccagatacatctgc
tctgggggtactggtcaagttgtcaggatatgggatctccaaagaaagcgttgtatcaaa
tggttgaaaggtcacaatgcttcaatatccggaaccacctacaattgcaaagatgagcac
ttggcgtccattagcgtcaacgggaatctcattgtccacaaccttgcttctggtgcaaga
gctgctgatttcaaggatcctcatcaacaggtgttgagagtacttgactattctcaagtt
agccggcatcttttggcgacagcaggggatgatggctctgtgcatatgtgggatacaact
ggtagaactcctaaggtttcttggttgaagcagcattctgctcctactactggtcttagc
ttctccccttcgaatgataagatcatttcttctgttggcctggataaaaagctctatact
tatgactcgggtactaaaaaatccacattttgcattgcctatgaggccccattttcttca
ttggcattcagagatgatggttggatattggctgccggaacaagcaatggacgagtggtg
ttctatgatgttcgtggaagaccacagccttttacagttctacgtgcttatggtaattca
gaggctgttacgagtttgtcctggcaaagatctaagcctactcctgtgaatgagaagaac
tgtacagctgaggtcgcccttttaggaggagctgttgaggattcagttttgatgcccgat
ccacttccttctgtgacattatctaatgtatcacagacagccactttgcctggtcctcgt
cgttcaagttctgtagaatcatcgtcttttactgcaacaatgggtggatatacaaacagt
ggtttgtcttcggaggaaacccctcatagaagctcattgcgtgctggaggaatactccca
agattgcatgcaactcgtagtgacaacttcaaagatgacatggaagtgttctcaccactt
gttgatgttcaacctattacgccctcactggataagctgtggaaggatcctgatggatcc
aagaatgatcaagctggagaaaataagacctcttttctattccctaataggaaattcact
tttccagaagttggaagcaatacacatccaatttttgattggaaacctagcgctgctgcc
aaacaggatgacaatcactccactattcctggatttactgcagatgcagcttccagaagc
gacgattcctcgtcgcttactcctccggaggcgtggggaggtgagcgattgtcagagaag
cttgctctttatcgtcagaatggatctctgccatcacggttttctatgctgacatcagct
agtacttcgacatcaatgttagctggattgcaagatccatctcctgcaaaccagtcttcc
atgaactactctactagtcctagtcttttctcggcaacctctcgagcaaaagatatgtca
tcaagtcaagaaatgtcactcgggttctcaggacatgttccttttagctctctttcaatg
aatattggatccaaatctggtacttcccagccaaatcttgaatccactgggccatcatct
tggaatctgtctagaaaattatccacctatgctgagagaataagtacttctgcagcttat
actgatggtgtttctgcttcattgggctcacctaaaataaagaaaactggagttgaaacc
cgagaagaactgcggaacagtttgttatccagatcagatacatcatctccttctgaagtc
ggattacccccatctgaaaatggagcgttacttccacaccagagaatgtctccagcggat
cttcagcaaggaacatcttcgtttacagttcagctatttcagcatacactctcagaaact
ctatcatcctttcaaaaatcaattcatgaagatgtcagaaaccttcacattgaaattctg
agacaatctcatatgcaagagatggaactatcaaattttatgaactcggttcttgataaa
ttagacggacttacagaagaagttcagactttaaggaaagaaaatgctcagcttcgccaa
ttgctttag
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