Silene latifolia (white campion): 141657495
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Entry
141657495 CDS
T11116
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141657495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141657495
Enzymes [BR:
slaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141657495
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
141657495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
141657495
NCBI-ProteinID:
XP_074320854
LinkDB
All DBs
Position
5:complement(67944074..67963760)
Genome browser
AA seq
1674 aa
AA seq
DB search
MGTEMGTETVESVRFGIYTDEEVHKLSVMKITNRELLTNVGQPQPDGLYDPSLGPFDDVS
SCKTCGQRSFYCPGHCGHIDLIQLVYHPLLFNTLCRILQNTCFSCFHFRATREDVQLCVA
KLNLIREGRIADSRALESLTSVDSDSDNESAGIQVGYKHEDQREWTSLQLTEAHLILYNF
FKNRTSKCSCGAKNPAISKPVYGWLQVDAMSEASIRSNAMRGFKVDSEIAEDDYDKSASE
VEDAENHNNGDVNSKKRQGKKNDKYSELLKPKNKRSFLPTEVKEILSHLWVEEAALCSFI
SDIQQHKLPSEKKSSFMMFFIKTLLVPPTKFRPPSKGGDSVMEHPQTILLQKILDSNKNL
ANAYQQDADRTKAWLRLQQSVNTLFDSKSAAGIGQKDMACGICQLLEKKEGMFRQKMMGK
RVNFACRSVISPDPYLAVNEIGIPPVFALRLTYPERVTPWNMSDLRDAIANGPDVHPGAT
HYVDKMSTTKLPSNKKSRISISRKLPSSKGVLTQPGKSSRYEYEGKVVLRHLRNGDIVLV
NRQPTLHKPSIIALKVRVLPGERTLRFHYANCDSFNADFDGDEINVHFPQDEISRSEAYN
IVNANNQYIVPTRGDPKRALIQDHIVSAVLLTKRDTFLTWAEFSELLYASGVCSFGTPSL
NTNSGKKISVLESEDIIRANPPAIIRPRRLWTGKQVITAILNHVTRGRLPFTVKKRAKIA
REYFGKDESKKKNAEGLQKIDEVPKKKKKTKNMVEPIHNIDEDIVHVHKNELVQGVIDKE
QFGKYGLVHTVQEMYGPSAAGNLLSVLSRVLTAYFQMHGFTCGVDDLLLIQTYDEQRKQL
LQISENCGEEVHLQFIGREKQHLESSEMQIEIEKAIRRNGDSAVALLDGMMRSKLNTLNS
AVTKLFPEGLNKPFRNNCLSLMTLSGAKGGTFNFQQISLLLGQQELEGKRVPRMVSGKTL
PCFPAWDSSARAGGFISDRYLTGLRPQEFYFHCMAGREGLVDTAVKTSRSGYLQRCLIKN
LECLKVHYDYTVRDADGSIVQFRYGEDGVDVHQKNYMQEFEALALNQLLIMSNNPLSQSD
HSCVSKFIEEDNEVPNQLATKAEKFSTDHALDINCGLMRRKDRSNFLKLVRNKYYMSLAQ
PGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASVAIKTPTMTC
PLLKTKGKDDAECLAAKLKRITVADVIEKLDVSLVPFTVDNNNICSIYKLQIKLYEPELY
PSHTDITLEDCHSTLEDNFVEDLQNAMESHLLLLEKINVISSVSEKGSDETDGDISVSNR
PDGGDDDDDDEGSGEGAEDLGLDAQKANRQATDEMDYEDNEEEEEEEEEEEKEEEEEEEN
KAKQEATDEVGDEEDDDEVEEEMSVAEDVGEVEQIEHENMKEDTKQVVQKTFSRSGSTRQ
NVKQASKKKKAERVEVCHLESEGVFFEVHFKLINEPHILLAQIAEKTAKKVYVKTAGKIE
QCKVVELHLDDSDLGGIPMLKKGKESRLALQTAGLDFPAFWDMQDDLDVRFISSNDIHAM
LNTYGVEAARATIITEIFTVFGHYGVSVDMRHLTLIADYMTHTGGYRPMSRSGGIADSTS
TFSKMSYESASKFLTDAATFGLKDNLETPSARICLGLPAKVGTGCFDLMQQIVV
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggggacggagatggggacggagacagtggagtctgttcgctttggtatctataccgac
gaggaggtccacaagctcagcgttatgaaaattaccaaccgtgagttgctaactaatgtt
ggccagcctcaacctgatggtctttatgatccttctttaggtcccttcgacgatgtttct
tcttgcaaaacctgtggccaacgaagtttctactgccctggacattgtggtcatattgat
ctcattcaactagtttaccatcccctactgtttaatacgctctgccgtattctacagaac
acctgtttcagttgctttcattttagggctaccagagaggatgtccaattatgtgtcgcc
aaattgaatctcattagagagggtcgtattgctgactctagggcgcttgaatctttgacc
tctgtcgactctgatagcgacaatgaatctgctggaattcaagtcggttacaaacatgag
gatcagcgtgaatggacatctcttcagcttactgaagcacatctgattttatataatttt
ttcaagaatagaactagcaaatgtagttgtggcgcaaagaatcctgccatttccaaacct
gtttacggatggcttcaagtggatgccatgtcggaagcgagtataagaagcaacgcaatg
agaggctttaaggttgattcagaaattgctgaagatgattatgataagtctgcatcagag
gtagaagatgctgagaaccacaataatggtgatgtaaattcaaaaaagcgtcaaggaaaa
aagaatgataagtattcagaactcctgaagccgaaaaataaacgttctttcttaccaaca
gaagtaaaagagatattgtctcatctatgggtagaagaagccgccctatgctccttcatt
tctgatattcaacaacataagctaccttcggagaaaaagtcttctttcatgatgttcttt
ataaaaactcttcttgtgcctccaacaaagttccgccctccttctaaaggaggtgattca
gtgatggagcatcctcaaactattctactgcagaagattttggattctaataaaaatctg
gcaaatgcttatcagcaggatgctgatcggaccaaagcatggttaagacttcaacaatct
gtaaatactttgtttgatagcaagagtgctgcaggcataggtcagaaagacatggcttgt
ggaatatgtcaattgctggaaaaaaaggaaggcatgttcaggcagaagatgatggggaag
cgagttaattttgcctgtcgttccgtgatttcccctgatccatatttggctgtcaatgag
attggtattcctcccgtttttgccttacgattaacgtatcctgagagagttactccttgg
aacatgtctgacttacgggatgctattgctaatgggcctgacgtacaccctggagccaca
cattatgttgacaaaatgtcaactacgaaactaccatctaacaaaaaatcccgtatctcg
atctccagaaagttaccttcttctaaaggagttttaacacaacctggaaagagcagccgt
tatgaatatgaagggaaagttgtgttgcgtcacctccgcaatggggatattgttcttgtg
aatcgccagccgactcttcataagccaagtattatagcacttaaagttcgagtcttgcct
ggggagaggactcttcgatttcattatgcaaattgcgattccttcaatgctgattttgat
ggcgatgaaattaatgttcactttccacaagatgagatatcacgctctgaagcttacaac
attgtaaatgctaataatcagtatattgttccaacacgtggtgatcctaaaagagcttta
attcaggatcatattgtgagtgctgtacttctaacaaagagggatacttttcttacgtgg
gccgaattcagtgaacttctctacgcatctggtgtatgttccttcggtacaccctcttta
aacactaattctggtaagaaaatatctgtactggagtcagaagatattatacgggccaat
ccacctgctataataagacccagaaggctttggactgggaagcaggtcataactgctatt
ttaaatcatgtaactagaggccgtttgccatttactgtcaaaaagcgtgctaaaattgca
agggagtactttgggaaggatgaatccaaaaaaaagaatgctgagggtcttcagaagatt
gatgaagttcctaaaaagaaaaagaagactaagaacatggtggaacccattcacaacatt
gatgaggatattgtgcatgttcacaagaatgaactggtccaaggagttatagacaaggag
caatttgggaagtatggcttggtccacactgtgcaggaaatgtatgggcctagtgctgcc
ggaaacttactttctgttctgagtcgtgttctgactgcttatttccagatgcatggtttt
acttgtggagttgatgatcttcttctaatacaaacatatgacgagcaaagaaaacagttg
ctccaaattagcgagaactgtggagaggaagttcacttgcagttcattggtcgcgagaaa
cagcacttagagtcctctgagatgcaaattgaaatcgagaaagcgatacggcgcaatgga
gactctgcagtagcacttcttgatggaatgatgagaagcaaacttaataccctgaactca
gcagtcactaagcttttcccggagggcttaaacaagccatttcggaacaactgcctttca
ttgatgacactctctggagcaaaaggtggcacgttcaacttccaacaaatctctctcctg
ctggggcagcaagagttggaaggaaagcgtgtcccccgaatggtctctgggaagacattg
ccatgctttcctgcgtgggacagttcagctcgagctggaggatttattagtgaccgttat
cttactggtctacgaccccaagagttctacttccactgtatggctggtcgtgaaggatta
gtggatactgctgttaagacctctcgcagtggatacttgcaaagatgcttgataaagaac
cttgagtgtctcaaagttcattatgattacactgttcgtgatgctgatggatctatcgtt
cagttccgctatggagaagatggtgttgacgtacatcaaaaaaactatatgcaggagttt
gaagcgttggcattgaatcaactgctaattatgagtaataatcctcttagccaaagtgat
cattcatgtgtatccaagtttattgaagaagataatgaagttccaaatcaacttgccacg
aaagctgaaaagttttctactgatcatgctttggatataaattgtgggctaatgcgcaga
aaggatcgttcaaactttcttaaactggtgaggaataaatattacatgagtctcgcccag
cctggggagcctgttggggttattgccgcccagtcagttggcgaaccatcaacacaaatg
accttaaacacattccatcatgctggtcgaggggaaatgaatgttacactgggaatacca
cgtctacaagaaatattgatgactgcatctgttgctatcaaaactccgacgatgacatgc
cctctgctgaagaccaagggaaaggatgatgcggaatgtcttgctgctaaattgaaaagg
atcactgtagctgatgtgatagaaaaattggatgttagtcttgtgccgttcactgttgac
aataacaatatctgcagtatttataagcttcaaataaagctgtacgaacctgaactttat
ccttctcacactgatataacgttggaggactgccactctacccttgaagacaattttgtg
gaggacttgcaaaatgcaatggaaagtcatttgcttttgcttgaaaaaattaatgtcatc
agttctgtatctgagaagggctcagatgaaactgacggggatatctccgtaagcaatcga
ccagatggcggcgatgatgatgatgacgatgaaggcagtggtgaaggagctgaagattta
ggtttagatgctcagaaagcaaaccggcaagctacagacgagatggattatgaggataac
gaagaagaagaagaagaagaagaagaagaagaaaaagaagaagaagaagaagaagaaaat
aaggcaaagcaggaagctacagatgaggtgggcgatgaggaggatgacgatgaagttgaa
gaagaaatgtctgtggctgaagatgtaggtgaggttgaacaaattgagcatgaaaatatg
aaagaggatactaagcaagttgtacagaaaaccttctctaggtctggttcgactcgtcaa
aatgtgaaacaagcctctaaaaagaagaaagcggaaagagttgaagtatgtcaccttgaa
tctgaaggagtattttttgaagtgcattttaagttgatcaatgaacctcacatactgttg
gcacagatagctgagaagacagcgaagaaagtttatgtgaagactgctggcaagattgag
caatgtaaggtagttgaacttcatttggatgattctgacttgggtggaattccgatgctc
aaaaagggtaaagaatctcgacttgccctccaaaccgcgggcttggattttccggcattt
tgggacatgcaggatgacctcgacgtgcgattcattagttcgaatgatatacatgccatg
ctaaatacatacggggtcgaagctgctagagcaaccattataacagagatattcacggta
tttgggcattatggagtttcagttgatatgcgccacttaaccttgattgccgattacatg
acacacacgggtggttataggcctatgagtagatcagggggcatagcagactcgacttca
actttcagcaagatgtcctatgaatcagcttccaaattccttacggatgcagctactttt
ggattaaaagataacttagagactccttcggccagaatttgccttggcttgcctgctaaa
gttggtactggatgttttgacttgatgcaacaaatagttgtgtag
DBGET
integrated database retrieval system
