KEGG   Silene latifolia (white campion): 141657609
Entry
141657609         CDS       T11116                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
slaf  Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:slaf03041]
    141657609
Spliceosome [BR:slaf03041]
 Complex B
  Other components
   Complex B specific factors
    141657609
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd LisH_TPL Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SPT8 Ge1_WD40 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd DUF7165 Beta-prop_LRRK2 VPS8_N Beta-prop_IP5PC_F PALB2_WD40 zf_topless Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 141657609
NCBI-ProteinID: XP_074320996
LinkDB
Position
5:complement(79348192..79358740)
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHKTFQTLQSECQVSLNTVDSIETFIADINGGRWDAV
LPQVSQLELPRKKVEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEHPERYLRLEH
LLVRTYFDPHEAYQDSTKERRRAQIAQGLSTEVSVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAALKQDVEDMYPTTLLHTIKFGKKSHPECTRFSPDGQFLVSCSVDGLIEV
WDHISGKLKKDLQYQAEETFMMHDEAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSAGVTSLCFSRDGSQILSTSFDTTARVHGLKSGKLLKEFRGHTSYVNYAIFTND
GSRVITASSDCTVKVWDGKTTECLHTFKLPPPLRGGDASVNSVHLFPKNMDHIVVCNKTS
SVYIMTLQGQVVKSFSSGKREGGDFAAACLSPKGEWIYCVGEDRNLYCFSYQSGKLEHLM
KVHEKDVIGVSHHPHMNLVATYGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgacccttgaaatcgaagcacgagatgtaatcaagattgtcttacaattctgcaaa
gaaaattcgttgcacaaaacattccaaaccctacaaagcgaatgtcaagtttcgctcaat
acggtcgacagcatcgaaactttcattgctgacattaatggcggcaggtgggatgctgtt
ttgccacaggtgtctcagcttgagcttcctaggaagaaagtcgaggacttatacgagcag
attgtgttagagatgatcgagctaagggagctggatactgcacgggcaatattgaggcaa
actcaggtgatgggagtcatgaagcaagagcatccagagagatacttacggcttgagcat
ctgcttgttcggacgtattttgatcctcacgaggcttaccaagattcaacaaaagaaaga
cgccgtgcacaaattgcacaaggcctttctaccgaagtttctgttgtgccaccatcacgg
ttgatggctctgattgggcaagctttgaagtggcagcaacaccaaggtttacttcctcct
ggaacacagttcgacttattccgtgggactgctgctttgaagcaagatgtcgaggatatg
tatcctacaacacttttgcatactattaagtttgggaagaaaagtcacccagagtgtact
cgattctcacctgatgggcagttccttgtttcctgctctgttgatggtcttatagaggta
tgggaccatatcagcgggaagctcaaaaaagatcttcagtaccaagctgaggagactttt
atgatgcacgatgaagctgtcctttgtgttgattttagccgagattcagaaatgcttgcc
tctggttcacaagatgggaagatcaaagtgtggcgtataaggacgggtcagtgtttacgt
cgtcttgaacgtgctcattctgcaggagttacaagcctttgcttttctcgagatggaagt
caaatattaagtacatcatttgatactaccgctagggttcatgggttgaagtcagggaag
ttgttaaaagaatttcgtgggcatacttcatacgtcaattatgcaatatttacaaatgac
gggagtcgtgtgatcacagcatctagtgattgcactgttaaggtttgggatgggaagaca
actgagtgccttcacacatttaaactaccacctcctttaaggggtggagacgcttctgta
aattctgtccatcttttccccaaaaatatggatcacattgttgtttgcaacaagacatca
tctgtatacattatgacacttcaaggacaggttgtgaagagtttctcttctggtaaaaga
gaaggtggagactttgcagctgcttgtttatcacctaaaggagagtggatatattgtgtt
ggtgaagacaggaacttgtattgttttagctaccaatctggtaaacttgagcatctgatg
aaggtgcacgagaaggatgtaatcggtgtatctcatcatcctcacatgaatcttgtggca
acctacggtgaagattgcacaatgaagctatggaagccttga

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