Silene latifolia (white campion): 141657773
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Entry
141657773 CDS
T11116
Name
(RefSeq) protein argonaute 4A-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141657773
03036 Chromosome and associated proteins [BR:
slaf03036
]
141657773
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141657773
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
141657773
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
141657773
microRNA pathway
RISC loading complex
141657773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
141657773
NCBI-ProteinID:
XP_074321212
LinkDB
All DBs
Position
5:complement(87539352..87555946)
Genome browser
AA seq
911 aa
AA seq
DB search
MASHKHESGLPPLPPLVPGVTPIVVLPEESSAPKRVPMPRRGLGTRGQNIRLLTNHLQVR
MPNSDNFFYQYSVKISYEDGHPVEVKGIGRKVLDKVLETYGGSELHGKQFAYDGEKTLFS
LGPLVGNSELQGKQFECTVVLEDQRSNRSGGDGSPSGGSPGHGDKKRLKRPARSKIYKVN
LSYAAMIPLKAITDALRGQETEQFQDAVRVLDIILRQNAARTGCLLVRQCFFRDHLRNFV
DIGGGVLGCRGFHSSFRATQGGLSLNMDVSTTTIVQPGPLLNFLVANQNVRHPQYIDWTK
AKRTLRNLRISAQPTNMEYKITGLSDKSCRHQTFELRQKNSQGEYEGVEITVYDYFLKHR
NIDLRDSADFPCVNVGKPKRPVYIPVELCSLVSLQRYTKALSGSQRTSLVENSRQKPRDR
MAALTEALNTSNYGSDPLLRSSGIAINNQFLGIEGRVLTAPKLRVGNGEDLIPQRGRWNF
NKKTLLDAIKLERWAILNFSARVDMDSLKRDLVKCGQNKGMRVNYPLGVFFESSQDRSYP
AEKRVDMMLENVQSELREPPQLLLCILSDRKNSDIYGPLKKKCLVDLGVVTQCIAPKRLN
DQYLTNVLLKINAKLDGLNSKLAVEAAESIPLVSGVPTLIIGMDVSHGSPGRADIPSIAA
VVSSRRWPSISCYRAAVRTQSPKLEIIDGLFKPVAGTNKDEGMVRELLYDFHDSSSGAKP
EHIIIFRDGVSESQFSQVLNKELDKFKEACKYLQEDYCPKFTLIVAQKNHHTRFFLHNSP
DNVPPGTVIDNTICHPRNNDFFMCAQAGMIGTSRPTHYHVLHDEIGFAADDLQELVHSLS
YVYQRSTTAISVVSPIYYAHLAAAQVGQFIKLDEFSETSSSQGGDITTAGNIQVPQLPPL
KANVRNSMFFC
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccataaacatgagtcgggtcttcctcctttgcctccacttgtgccaggtgtt
acaccaattgtcgtccttccagaggagtcgtcagcaccaaaacgtgttcccatgccacga
agaggattaggtacgagaggtcagaatattcggctcttgaccaaccaccttcaagtccgt
atgcctaactcagacaacttcttctatcaatacagtgttaagataagttatgaagatggt
catcctgttgaagtcaaaggcatcgggagaaaggttctcgacaaagtacttgaaacttat
ggaggatctgaactacatggtaagcagtttgcttacgatggagagaagactcttttctct
ctcggacctctagtaggtaactctgaactacaaggtaagcagtttgaatgtactgtggtg
ttggaggatcaacgctctaataggtctggtggggatggtagcccgagtggtggaagtccg
ggccatggtgataaaaagagactcaagcgaccagcgcgttcaaagatttacaaggttaat
ttgagctatgctgccatgattcctttgaaagcaataactgatgcattgcgcggtcaagag
actgaacagtttcaagatgctgtcagagtactggatatcattctgcgacaaaatgcagca
aggacgggttgtctgttagtgcgacagtgcttctttcgtgatcacctgcgcaactttgtt
gacattggtggtggagtgcttggatgcaggggatttcactctagtttccgggctactcag
ggtggtctctcgctaaacatggatgtgtcaaccaccacgattgttcagcccggccctttg
ctgaacttcctcgttgcaaaccagaatgttcgtcatcctcagtatattgattggaccaag
gctaaaagaactctgaggaatttgagaatttccgctcagccaactaacatggagtacaag
ataaccgggttaagtgacaaaagctgtagacatcaaacctttgaactcagacagaaaaat
agtcaaggagaatacgagggtgttgagataactgtctacgactactttttgaagcaccgc
aacattgatctccgtgactctgctgattttccttgcgttaatgtagggaaaccaaagcgg
cctgtttacattcctgtcgagctttgcagcttagtttcgctgcaacgctacaccaaggct
ttatcgggttcacaaagaacatcacttgtagagaattcacgtcagaaacctcgcgacaga
atggctgccctgactgaggccttgaacaccagtaattatggatcagatcctttgcttcgc
tcatctggcattgctatcaacaatcaatttcttggaattgaaggccgggtgttgacagca
ccaaagctgagagtcggaaatggtgaagatttaatcccacaaagaggtcgatggaacttc
aacaagaagacgctgttggacgcaataaaattggagagatgggcaattcttaacttctct
gcacgtgtcgatatggacagcttgaagagagaccttgtaaagtgtgggcaaaacaaggga
atgagggtaaattatccccttggtgtttttttcgagagttctcaagatcgaagttatcca
gcggaaaaaagagtggatatgatgttagaaaatgtgcagagcgaactgcgtgagccgcct
cagcttcttctgtgtattctttcagacaggaaaaattctgacatttatggtcctttgaag
aagaaatgtcttgttgatcttggtgttgtgacccaatgcatcgccccaaaaagattaaat
gatcagtatctgacaaacgtcttgctgaaaataaatgctaagcttgatggactgaactcg
aaacttgcagtggaggctgctgagtcaatacctctggtttctggagttcctactctaatt
attgggatggatgtctcacatggttcgcctggacgtgctgatatcccgtcaattgcagca
gttgtgagttctaggagatggccatcaatttcttgttatcgagctgcagtgcgtacacaa
tctcccaagctcgaaatcatagatggtttattcaaacctgtcgctggtactaataaagat
gaaggcatggttagggaattgttgtatgacttccacgacagtagttccggagcgaagcct
gaacacataatcattttcagggatggtgtcagcgaatcacaattcagtcaagtcttgaac
aaggaacttgataagtttaaagaggcctgcaagtatttacaggaagattattgtccaaag
ttcacgctgattgtagcacagaagaatcatcacaccaggtttttcctgcacaactctcca
gacaacgtaccacctggaactgtcattgacaacaccatctgtcatccgaggaacaatgac
ttcttcatgtgcgcccaggcgggaatgataggaacttcaaggccaacgcattatcatgtg
ctgcatgatgagattggtttcgcagctgatgatttgcaggaactagttcactccttatcc
tatgtgtatcagcgtagtacgacagcgatctctgttgtgtcgccgatttactatgctcat
ctggcagcagcacaagtagggcagttcatcaagttggatgaattctcagagacctcgtca
agtcaaggaggcgacatcactactgctggcaatatccaagtccctcagcttcctcctttg
aaggctaatgtccggaactccatgttcttctgctga
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