Silene latifolia (white campion): 141657779
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Entry
141657779 CDS
T11116
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00280
Valine, leucine and isoleucine degradation
slaf00650
Butanoate metabolism
slaf01100
Metabolic pathways
slaf04146
Peroxisome
Module
slaf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
141657779
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
141657779
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141657779
Enzymes [BR:
slaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
141657779
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
141657779
NCBI-ProteinID:
XP_074321221
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Position
5:complement(87568126..87573052)
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AA seq
417 aa
AA seq
DB search
MSSLQEPLGFDKLPSMSTIDRIQRFSSGACRSQGEDLGMGVRWIEGSRCSTSNSCSEDSE
DRMEEVFPWGRKNRDKFPGDSFTRRSLSLGRNHMARDNCTSITRSKAFCGIPTQVKIVEV
GPRDGLQNEKNLVPTHIKVELIRRLVSTGLSVVEATSFVSPKWVPQLSDAKDVMNQVRHV
DAARLPVLTPNLKGFEAAIAAGAKEVAVFASASEAFSKSNINCSVDESLARYRAVVSAAK
KLSIPVRGYVSCVIGCPVEGPIPPSKVAYVAKELYDMGCFEISLGDTTGVGTPGTVIPML
EAVMAVVPAESIAVHFHDTYGQSLPNILVSLQMGISTVDSSIAGLGGCPYAKGASGNVAT
EDVVYMLHGLGIRTNVDLGQLLSAGEFICKHLGRLSGSKTAIALGRVAADTSRISTL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttgcaggagccccttggttttgacaagctacctagcatgagcactattgat
agaattcagaggttttcatcgggtgcttgtcgatcacaaggggaagacttgggcatggga
gtacgctggattgaaggaagccgatgcagcacatccaacagctgcagtgaggattctgaa
gatcgtatggaagaagtttttccttggggtaggaaaaatcgagacaagttcccaggcgac
tctttcacccgaaggagcctgagcctaggtaggaatcatatggctcgagacaactgcact
agtatcacaaggagtaaggctttttgtggaataccaacgcaagtgaaaattgttgaagtt
ggcccaagagatggactgcaaaatgagaagaacctggtgcctacccatattaaagttgag
ctgatccgaagactagtctctactgggttatctgtggttgaagctacaagttttgtctcg
ccaaaatgggtacctcagctatcagatgcaaaagatgtgatgaaccaagtccggcacgtt
gatgctgcacgtctccctgtgttgaccccaaatttaaagggatttgaagcagctattgca
gctggtgcaaaggaagttgctgttttcgcatcagcttcagaagctttctcaaagtcgaac
ataaactgcagcgtcgatgagagtcttgctcgctatcgtgctgttgtttcagctgctaaa
aagctttcaattccagttcgcgggtatgtatcatgtgtgattggttgtcctgtggaaggg
ccaattcctccatcgaaagtggcttacgttgctaaggaactttatgacatgggctgcttt
gagatctccctcggtgatactaccggagttggtactccaggcacagtaattccgatgctc
gaagctgtaatggctgttgttcctgctgagagcattgctgtacattttcacgacacttac
ggtcaatctcttcccaatattttggtctcgcttcaaatggggataagcacagtcgattcc
tcaatagcaggactcgggggttgcccctacgcaaagggagcgtcgggaaacgtggccacc
gaggatgttgtgtacatgcttcatggacttggaatccggactaatgtagaccttggccag
ctgctgtcagctggtgagttcatctgcaaacacttaggtcgtctgtctggttccaaaacc
gccattgcattgggccgtgttgctgccgacacctcgaggatctcaactttgtga
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