Silene latifolia (white campion): 141658652
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Entry
141658652 CDS
T11116
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
slaf04141
Protein processing in endoplasmic reticulum
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141658652
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141658652
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141658652
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141658652
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141658652
03009 Ribosome biogenesis [BR:
slaf03009
]
141658652
03110 Chaperones and folding catalysts [BR:
slaf03110
]
141658652
04131 Membrane trafficking [BR:
slaf04131
]
141658652
03051 Proteasome [BR:
slaf03051
]
141658652
03029 Mitochondrial biogenesis [BR:
slaf03029
]
141658652
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141658652
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
141658652
Spliceosome [BR:
slaf03041
]
Complex B
Other components
Prp19 complex
141658652
Complex C
Prp19-CDC5 complex
141658652
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141658652
Chaperones and folding catalysts [BR:
slaf03110
]
Heat shock proteins
HSP70 / DNAK
141658652
Membrane trafficking [BR:
slaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
141658652
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
141658652
Proteasome [BR:
slaf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
141658652
Mitochondrial biogenesis [BR:
slaf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
141658652
Exosome [BR:
slaf04147
]
Exosomal proteins
Proteins found in most exosomes
141658652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DUF927
DDR
ParM_N
GEVED
Motif
Other DBs
NCBI-GeneID:
141658652
NCBI-ProteinID:
XP_074321652
LinkDB
All DBs
Position
6:complement(22924715..22931730)
Genome browser
AA seq
636 aa
AA seq
DB search
MGNNNEEWPVIGIDLGTTYSCVGIWQHERVEIITNDQGNRTTPSWVAFTKTERLIGEAAE
NQGRINPTNTIFDAKRLIGRRFSDEMVQKDMKLWPFKVIAGPDYGQDKKPLVMVTYMGEE
KQFTAEEISAMILMKMKDTAEAYLGMPVNNAIVTVPAYFNDSQRQATKDAAAIASLNVVR
IINEPTAAAIAYGLDKKGLLESDNSKKNVLVFDLGGGTFDVSLVSIQKNIFEVKAVGGDA
HLGGNDFDNRMVTHFVEEFQRKHNIDLSKNPRALGRLKTACERAKRALSTTAQTTIELDC
LSGGIDFSSIVTRARFDKLNVDLFKKCIDPIQQCLSDADISRNDVHDIVLVGGSTRIPKV
QQLLQDFFDGKELSRSINPDEAVAYGAAVHAGILCGATSKVSCYLLIDITPLSLGVEVGS
GNMSVVIPRNTTIPTRQERIYGALHTKKRMYGGTDNDCRASVLEIPVYEGERLKAQDNNF
LGVFELSGIAPSNNGSSSLINVCFEIDDNGILNVSAEDTISGNRSEIRITNRSRLTKTEM
DRMTNEAEEYRSQDKKHEEMVKAKNTLEDYANDMWEKLNNCGKKIGANDKKTIMDAIQQI
FEWLDWNSDQVFDAGKYVEKLEEIELLCKAFISKLR
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacaataatgaagaatggccagttataggaatcgatctagggacgacgtattca
tgcgttggaatatggcagcatgagcgtgttgagataatcactaatgatcaaggcaacaga
accactccgtcttgggttgcattcaccaaaaccgagaggcttattggtgaagccgctgag
aatcaaggccgcatcaaccctactaacaccatctttgatgcaaaacggctgattggtagg
agatttagtgatgaaatggtacagaaggacatgaagttgtggccatttaaggtcattgct
ggtcctgattatggtcaagataagaaaccacttgtaatggtaacctacatgggagaagag
aagcaattcactgctgaggagatatctgctatgattctcatgaaaatgaaggataccgcc
gaagcgtatctaggcatgccagttaacaatgctattgttacagttcctgcctacttcaat
gactctcagcgccaagcaacaaaagatgctgctgccattgcgtccctcaacgtggtgcgc
atcattaatgaacccaccgcagctgccattgcttatggtctagacaagaagggattatta
gagagtgacaattccaaaaagaacgtgttggtttttgatcttggcggtgggacttttgat
gtctctttggtctctattcaaaagaatatctttgaagtgaaggcagtgggtggggatgcc
cacctcggcggtaatgattttgataatagaatggttactcactttgtagaagagttccag
agaaagcacaatatagatttgagtaagaatcctagggctcttggacgattgaagacagct
tgtgaaagagccaaaagagccctctcaacaacagcacaaacaactattgaactcgattgc
ctttctggtggaattgattttagctcaattgtaactcgtgctcgttttgataagttgaat
gttgatctgtttaagaagtgcattgaccccattcagcaatgtttgagtgatgctgatatc
agcaggaatgatgttcatgatatcgtccttgttggtggttcgactcgcatacccaaggtc
cagcagttgttgcaagacttctttgatggaaaggagctctcaagaagcatcaatcccgat
gaggctgttgcatatggagctgcagtccacgccgggatattatgtggtgcaaccagcaaa
gttagctgttatctcctaattgacattactcccttatcccttggtgttgaggtgggttcc
gggaacatgtctgtcgttatcccgagaaatacaactattccaacgagacaagagcgtatc
tatggagccttgcatactaagaagcgtatgtatggaggtactgataacgactgtcgggca
tctgttttggaaatccctgtctatgagggtgagagacttaaagcccaagacaacaatttt
ctgggagtctttgagctttctggcattgcaccgtctaataatggatcttctagcttgatt
aatgtttgtttcgagatcgacgataatgggattttgaacgtatcagcggaggacaccatc
tctggcaacaggagtgaaattaggatcaccaaccgtagtaggcttacaaagacagagatg
gatagaatgacgaatgaggcggaggagtacagatcacaagacaaaaagcatgaggaaatg
gtgaaagccaagaacacattagaggactatgccaatgacatgtgggaaaagcttaacaat
tgtgggaagaagattggagctaatgacaagaagacgataatggatgcaatacaacagata
tttgagtggttagattggaactctgaccaagtgtttgatgcaggaaagtatgtggagaag
ctagaagagattgaattattatgcaaggcttttatttctaagttgcgctga
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