Streptomyces laculatispora: P8A22_12010
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Entry
P8A22_12010 CDS
T09657
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
slai
Streptomyces laculatispora
Pathway
slai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A22_12010 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slai03021
]
P8A22_12010 (rho)
03019 Messenger RNA biogenesis [BR:
slai03019
]
P8A22_12010 (rho)
Transcription machinery [BR:
slai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P8A22_12010 (rho)
Messenger RNA biogenesis [BR:
slai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P8A22_12010 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLQ40646
UniProt:
A0ABY9I290
LinkDB
All DBs
Position
complement(2873032..2875092)
Genome browser
AA seq
686 aa
AA seq
DB search
MSDTTDLMGVTADKNVDSAAPAEGAATGTTARRRRSGTGLDGMVLAELQQVASGLGIKGT
ARMRKGQLIEVIKETQAGGSSAPKAKAAAAAPADEAETKPKRRATSKARTGAGDETPAAA
PADKAAAQQQIDIPGQPANDEQPAGERRRRRATAQAGSPETKADTKAQAKDRTQDEPKRE
TPAEDRSEPKAEAAADNAEGRRGDRQDRGQRGERGDRGDRGDRRERQRDRRGKGGDEQGG
GQGGQRQQRQGQGQGQNQGQGQQGGGGPQDDFDDEGGRRGRRGRYRDRRGRRGRDDFASD
APPVTDDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAV
RQPKDGERREKFNALVRLDTVNGMAPETGRGRPEFQKLTPLYPQDRLRLETDSNILTTRI
IDLVAPIGKGQRGLIVAPPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEEVTDMQR
SVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPAS
GRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNM
ELKLDRKLSDKRIFPAVDVDASSTRKEEILLGSDELAITWKLRRVLHALDQQQAIELLLD
RMKKTQSNAEFLLQIQKTTPAPGNND
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtgactgccgacaagaacgtcgacagcgccgcg
cccgccgaaggtgctgccactggcaccaccgcacggcgccgccgctccggcaccggcctt
gacggcatggtcctggccgagctgcagcaggtcgcgtccggcctcggcatcaagggcact
gcgcggatgcgcaagggccagctgatcgaggtcatcaaggagacccaggccggcggttcc
tccgcgcccaaggccaaggccgccgcagcggcccccgccgacgaggccgagaccaagccg
aagcgccgggccacctccaaggcgcgcaccggcgccggggacgagaccccggccgccgct
cccgccgacaaggccgcggctcagcagcagatcgacatccccggccagccggccaacgac
gagcagcccgcgggcgagcgtcgtcggcgccgtgcgaccgctcaggcgggcagcccggag
accaaggcggacaccaaggcgcaggccaaggaccgcacgcaggacgagccgaagcgcgag
acgcccgccgaggaccgctccgagcccaaggccgaggccgccgcggacaacgcggagggc
cgccggggcgaccgccaggaccgcggccagcgcggcgagcgtggtgaccgcggcgaccgc
ggtgaccgtcgtgagcgccagcgcgaccgtcgcggcaagggcggcgacgagcagggcggt
ggccagggcggccagcgccagcagcgccagggccagggccagggtcagaaccagggccag
ggccagcagggcggcggcggaccgcaggacgacttcgacgacgagggcggccgtcgtggc
cggcgcggccgttaccgcgaccgccgcggccgtcgtggccgtgacgacttcgcgagtgac
gcgccgccggtcaccgacgacgacgtcctgatccccgtcgcgggcatcctggacatcctc
gacaactacgcgttcatccggacctccggctacctgccgggcccgaacgacgtgtacgtc
tcgctcgcccaggtgcgcaagaacggcctgcgcaagggtgaccacgtcaccggtgcggtg
cgccagcccaaggacggcgagcgccgcgagaagttcaacgcgctggtccgcctcgacacg
gtcaacggcatggcgcccgaaaccggccgcggccgcccggagttccagaagctgacgccg
ctgtacccgcaggaccggctccgcctggagaccgactccaacatcctgacgacgcgcatc
atcgacctggtcgcccccatcggcaagggccagcgaggcctgatcgtggccccgccgaag
accggtaagaccatgatcctgcaggcgatcgccaacgcgatcacggtcaacagccctgag
tgccacctgatggtcgtcctggtcgacgagcgtccggaagaggtcaccgacatgcagcgg
tcggtgaagggtgaggtcatctcctcgaccttcgaccgtcccgccgaggaccacaccacc
gtcgccgagctggccatcgagcgcgccaagcgtctcgtggagctgggtcacgacgtggtc
gtcctgctggactcgatcacccgcctgggccgtgcgtacaacctcgcggcccccgcctcc
ggccgcatcctgtccggtggtgtcgactcgaccgcgctgtacccgccgaagcgcttcttc
ggtgccgcgcggaacatcgaggacggcggctcgctgaccatcctggccaccgcgctggtc
gagaccggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggcaacatg
gagctcaagctcgaccgcaagctctccgacaagcgcatcttcccggcggtggacgtcgac
gcgtccagcacccgtaaggaagaaatcctgctcggcagcgacgagttggcgattacctgg
aagctgcgccgggtgctccacgcgctggaccagcagcaggcgatcgagctcctcctggac
cggatgaagaagacccagtccaacgcggagttcctgctccagatccagaagacgacgccg
gccccgggcaacaacgactag
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